Gene : Glyma.04G199900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF90 - TRANSCRIPTION FACTOR BHLH137 Genomic Order:  1999
Name:  ? Glyma.04G199900 Secondary Identifier:  ? PAC:30488655
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G199900 0.5kb upstream 0.5kb upstream 3422 true Chr04: 47213255-47216676 Glycine max
Glyma.04G199900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47216177-47216676 Glycine max
Glyma.04G199900 0.5kb downstream 0.5kb downstream 3422 true Chr04: 47212755-47216176 Glycine max
Glyma.04G199900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47212755-47213254 Glycine max
Glyma.04G199900 1.0kb upstream 1.0kb upstream 3922 true Chr04: 47213255-47217176 Glycine max
Glyma.04G199900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47216177-47217176 Glycine max
Glyma.04G199900 1.0kb downstream 1.0kb downstream 3922 true Chr04: 47212255-47216176 Glycine max
Glyma.04G199900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47212255-47213254 Glycine max
Glyma.04G199900 2.0kb upstream 2.0kb upstream 4922 true Chr04: 47213255-47218176 Glycine max
Glyma.04G199900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47216177-47218176 Glycine max
Glyma.04G199900 2.0kb downstream 2.0kb downstream 4922 true Chr04: 47211255-47216176 Glycine max
Glyma.04G199900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47211255-47213254 Glycine max
Glyma.04G199900 5.0kb upstream 5.0kb upstream 7922 true Chr04: 47213255-47221176 Glycine max
Glyma.04G199900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47216177-47221176 Glycine max
Glyma.04G199900 5.0kb downstream 5.0kb downstream 7922 true Chr04: 47208255-47216176 Glycine max
Glyma.04G199900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47208255-47213254 Glycine max
Glyma.04G199900 10.0kb upstream 10.0kb upstream 12922 true Chr04: 47213255-47226176 Glycine max
Glyma.04G199900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47216177-47226176 Glycine max
Glyma.04G199900 10.0kb downstream 10.0kb downstream 12922 true Chr04: 47203255-47216176 Glycine max
Glyma.04G199900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47203255-47213254 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311083 5265 Fabidae View MSA
124068210 5270 Rosid View MSA
123746913 5271 Pentapetalae View MSA
122796649 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.7356 0.0 145.346 High High
cufflinks 26.7818 0.0 72.4189 High  
cufflinks 44.1449 0.0 124.749 High High
cufflinks 13.3412 0.0 35.6425    
cufflinks 2.48338 0.0 7.81037   Low
cufflinks 2.68082 0.0 8.34664   Low
cufflinks 2.99443 0.0 9.16633    
cufflinks 9.02034 0.0 24.4287    
cufflinks 5.9358 0.0 16.644    
cufflinks 5.735        
cufflinks 0.439       Low
cufflinks 29.864     High High
cufflinks 1.79        
cufflinks 0.237       Low
cufflinks 1.422        
cufflinks 6.598        
cufflinks 1.876        
cufflinks 10.275     High  
cufflinks 18.217     High High
cufflinks 5.556        
cufflinks 1.607        
cufflinks 4.883        
cufflinks 3.729        
cufflinks 0.992        
cufflinks 5.002        
cufflinks 1.328        

0 Strain