Gene : Glyma.19G174300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  1743
Name:  ? Glyma.19G174300 Secondary Identifier:  ? PAC:30513497
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G174300 0.5kb upstream 0.5kb upstream 4706 true Chr19: 43460887-43465592 Glycine max
Glyma.19G174300 0.5kb upstream 0.5kb upstream 500 false Chr19: 43465093-43465592 Glycine max
Glyma.19G174300 0.5kb downstream 0.5kb downstream 4706 true Chr19: 43460387-43465092 Glycine max
Glyma.19G174300 0.5kb downstream 0.5kb downstream 500 false Chr19: 43460387-43460886 Glycine max
Glyma.19G174300 1.0kb upstream 1.0kb upstream 5206 true Chr19: 43460887-43466092 Glycine max
Glyma.19G174300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43465093-43466092 Glycine max
Glyma.19G174300 1.0kb downstream 1.0kb downstream 5206 true Chr19: 43459887-43465092 Glycine max
Glyma.19G174300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43459887-43460886 Glycine max
Glyma.19G174300 2.0kb upstream 2.0kb upstream 6206 true Chr19: 43460887-43467092 Glycine max
Glyma.19G174300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43465093-43467092 Glycine max
Glyma.19G174300 2.0kb downstream 2.0kb downstream 6206 true Chr19: 43458887-43465092 Glycine max
Glyma.19G174300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43458887-43460886 Glycine max
Glyma.19G174300 5.0kb upstream 5.0kb upstream 9206 true Chr19: 43460887-43470092 Glycine max
Glyma.19G174300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43465093-43470092 Glycine max
Glyma.19G174300 5.0kb downstream 5.0kb downstream 9206 true Chr19: 43455887-43465092 Glycine max
Glyma.19G174300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43455887-43460886 Glycine max
Glyma.19G174300 10.0kb upstream 10.0kb upstream 14206 true Chr19: 43460887-43475092 Glycine max
Glyma.19G174300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43465093-43475092 Glycine max
Glyma.19G174300 10.0kb downstream 10.0kb downstream 14206 true Chr19: 43450887-43465092 Glycine max
Glyma.19G174300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43450887-43460886 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306016 5265 Fabidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.6744 0.0 141.056 High High
cufflinks 27.2489 0.0 72.9307 High  
cufflinks 18.4791 0.0 49.3407   Low
cufflinks 29.8975 0.0 80.2649 High  
cufflinks 39.8317 0.0 108.767 High  
cufflinks 33.8616 0.0 91.522 High  
cufflinks 36.2453 0.0 98.2468 High  
cufflinks 28.9962 0.0 77.775 High  
cufflinks 30.3196 0.0 81.4927 High  
cufflinks 7.951     High  
cufflinks 8.065     High  
cufflinks 7.75     High  
cufflinks 11.976     High High
cufflinks 14.568     High High
cufflinks 5.93     High Low
cufflinks 9.212     High  
cufflinks 7.747     High  
cufflinks 8.776     High  
cufflinks 10.297     High  
cufflinks 8.959     High  
cufflinks 8.909     High  
cufflinks 9.754     High  
cufflinks 9.702     High  
cufflinks 8.363     High  
cufflinks 8.193     High  
cufflinks 7.978     High  

0 Strain