Gene : Glyma.19G174400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33431:SF2 - GB Genomic Order:  1744
Name:  ? Glyma.19G174400 Secondary Identifier:  ? PAC:30514044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G174400 0.5kb upstream 0.5kb upstream 1796 true Chr19: 43467233-43469028 Glycine max
Glyma.19G174400 0.5kb upstream 0.5kb upstream 500 false Chr19: 43467233-43467732 Glycine max
Glyma.19G174400 0.5kb downstream 0.5kb downstream 1796 true Chr19: 43467733-43469528 Glycine max
Glyma.19G174400 0.5kb downstream 0.5kb downstream 500 false Chr19: 43469029-43469528 Glycine max
Glyma.19G174400 1.0kb upstream 1.0kb upstream 2296 true Chr19: 43466733-43469028 Glycine max
Glyma.19G174400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43466733-43467732 Glycine max
Glyma.19G174400 1.0kb downstream 1.0kb downstream 2296 true Chr19: 43467733-43470028 Glycine max
Glyma.19G174400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43469029-43470028 Glycine max
Glyma.19G174400 2.0kb upstream 2.0kb upstream 3296 true Chr19: 43465733-43469028 Glycine max
Glyma.19G174400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43465733-43467732 Glycine max
Glyma.19G174400 2.0kb downstream 2.0kb downstream 3296 true Chr19: 43467733-43471028 Glycine max
Glyma.19G174400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43469029-43471028 Glycine max
Glyma.19G174400 5.0kb upstream 5.0kb upstream 6296 true Chr19: 43462733-43469028 Glycine max
Glyma.19G174400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43462733-43467732 Glycine max
Glyma.19G174400 5.0kb downstream 5.0kb downstream 6296 true Chr19: 43467733-43474028 Glycine max
Glyma.19G174400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43469029-43474028 Glycine max
Glyma.19G174400 10.0kb upstream 10.0kb upstream 11296 true Chr19: 43457733-43469028 Glycine max
Glyma.19G174400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43457733-43467732 Glycine max
Glyma.19G174400 10.0kb downstream 10.0kb downstream 11296 true Chr19: 43467733-43479028 Glycine max
Glyma.19G174400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43469029-43479028 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311999 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21085 0.0 0.828639 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0254241 0.0 0.112535 Low Low
cufflinks 0.864808 0.0 3.18891   High
cufflinks 0.179247 0.0 0.7086 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.199122 0.0 0.78278 Low  
cufflinks 0.408427 0.0 1.55981    
cufflinks 0.012     Low  
cufflinks 0.013     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311       High
cufflinks 0.04     Low  
cufflinks 0.012     Low  
cufflinks 0.013     Low  
cufflinks 0.013     Low  
cufflinks 0.066     Low  
cufflinks 0.014     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.102       High

0 Strain