Gene : Glyma.04G202900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11073:SF1 - CALNEXIN 14D-RELATED Genomic Order:  2029
Name:  ? Glyma.04G202900 Secondary Identifier:  ? PAC:30490967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G202900 0.5kb upstream 0.5kb upstream 4288 true Chr04: 47545279-47549566 Glycine max
Glyma.04G202900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47545279-47545778 Glycine max
Glyma.04G202900 0.5kb downstream 0.5kb downstream 4288 true Chr04: 47545779-47550066 Glycine max
Glyma.04G202900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47549567-47550066 Glycine max
Glyma.04G202900 1.0kb upstream 1.0kb upstream 4788 true Chr04: 47544779-47549566 Glycine max
Glyma.04G202900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47544779-47545778 Glycine max
Glyma.04G202900 1.0kb downstream 1.0kb downstream 4788 true Chr04: 47545779-47550566 Glycine max
Glyma.04G202900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47549567-47550566 Glycine max
Glyma.04G202900 2.0kb upstream 2.0kb upstream 5788 true Chr04: 47543779-47549566 Glycine max
Glyma.04G202900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47543779-47545778 Glycine max
Glyma.04G202900 2.0kb downstream 2.0kb downstream 5788 true Chr04: 47545779-47551566 Glycine max
Glyma.04G202900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47549567-47551566 Glycine max
Glyma.04G202900 5.0kb upstream 5.0kb upstream 8788 true Chr04: 47540779-47549566 Glycine max
Glyma.04G202900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47540779-47545778 Glycine max
Glyma.04G202900 5.0kb downstream 5.0kb downstream 8788 true Chr04: 47545779-47554566 Glycine max
Glyma.04G202900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47549567-47554566 Glycine max
Glyma.04G202900 10.0kb upstream 10.0kb upstream 13788 true Chr04: 47535779-47549566 Glycine max
Glyma.04G202900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47535779-47545778 Glycine max
Glyma.04G202900 10.0kb downstream 10.0kb downstream 13788 true Chr04: 47545779-47559566 Glycine max
Glyma.04G202900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47549567-47559566 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313038 5265 Fabidae View MSA
124065141 5270 Rosid View MSA
123737774 5271 Pentapetalae View MSA
122786584 5272 Eudicot View MSA
122045156 5273 Angiosperm View MSA
121344983 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.5825 0.0 164.886 High  
cufflinks 56.5073 0.0 218.415 High  
cufflinks 23.9986 0.0 89.5291 High Low
cufflinks 79.5833 0.0 355.208 High  
cufflinks 99.9872 0.0 495.758 High  
cufflinks 120.906 0.0 662.219 High  
cufflinks 189.25 0.0 1361.83 High High
cufflinks 72.3018 0.0 310.454 High  
cufflinks 74.4458 0.0 322.428 High  
cufflinks 30.629     High High
cufflinks 5.686     High  
cufflinks 18.288     High  
cufflinks 52.148     High High
cufflinks 67.782     High High
cufflinks 6.762     High  
cufflinks 9.656     High  
cufflinks 7.636     High  
cufflinks 25.185     High  
cufflinks 25.71     High  
cufflinks 6.069        
cufflinks 5.261       Low
cufflinks 7.439     High  
cufflinks 18.332     High  
cufflinks 6.288     High  
cufflinks 6.449        
cufflinks 5.814        

0 Strain