Gene : Glyma.04G203400 G. max Wm82.a2.v1
Defline:  (1 of 17) PF07899 - Frigida-like protein (Frigida) Genomic Order:  2034
Name:  ? Glyma.04G203400 Secondary Identifier:  ? PAC:30489392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G203400 0.5kb upstream 0.5kb upstream 5149 true Chr04: 47610954-47616102 Glycine max
Glyma.04G203400 0.5kb upstream 0.5kb upstream 500 false Chr04: 47610954-47611453 Glycine max
Glyma.04G203400 0.5kb downstream 0.5kb downstream 5149 true Chr04: 47611454-47616602 Glycine max
Glyma.04G203400 0.5kb downstream 0.5kb downstream 500 false Chr04: 47616103-47616602 Glycine max
Glyma.04G203400 1.0kb upstream 1.0kb upstream 5649 true Chr04: 47610454-47616102 Glycine max
Glyma.04G203400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47610454-47611453 Glycine max
Glyma.04G203400 1.0kb downstream 1.0kb downstream 5649 true Chr04: 47611454-47617102 Glycine max
Glyma.04G203400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47616103-47617102 Glycine max
Glyma.04G203400 2.0kb upstream 2.0kb upstream 6649 true Chr04: 47609454-47616102 Glycine max
Glyma.04G203400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47609454-47611453 Glycine max
Glyma.04G203400 2.0kb downstream 2.0kb downstream 6649 true Chr04: 47611454-47618102 Glycine max
Glyma.04G203400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47616103-47618102 Glycine max
Glyma.04G203400 5.0kb upstream 5.0kb upstream 9649 true Chr04: 47606454-47616102 Glycine max
Glyma.04G203400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47606454-47611453 Glycine max
Glyma.04G203400 5.0kb downstream 5.0kb downstream 9649 true Chr04: 47611454-47621102 Glycine max
Glyma.04G203400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47616103-47621102 Glycine max
Glyma.04G203400 10.0kb upstream 10.0kb upstream 14649 true Chr04: 47601454-47616102 Glycine max
Glyma.04G203400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47601454-47611453 Glycine max
Glyma.04G203400 10.0kb downstream 10.0kb downstream 14649 true Chr04: 47611454-47626102 Glycine max
Glyma.04G203400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47616103-47626102 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297571 5265 Fabidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.64566 0.0 17.5473   High
cufflinks 3.66229 0.0 12.208    
cufflinks 4.675 0.0 15.7555   High
cufflinks 3.48745 0.0 14.1796    
cufflinks 3.29589 0.0 11.2424    
cufflinks 2.25546 0.0 8.53932   Low
cufflinks 3.97584 0.0 13.0297    
cufflinks 3.51152 0.0 12.0728    
cufflinks 2.97454 0.0 12.4208    
cufflinks 0.616       Low
cufflinks 1.06        
cufflinks 0.997        
cufflinks 0.688       Low
cufflinks 0.745       Low
cufflinks 1.048        
cufflinks 1.322        
cufflinks 1.029        
cufflinks 1.147        
cufflinks 1.277        
cufflinks 1.415       High
cufflinks 0.956        
cufflinks 1.469       High
cufflinks 1.346        
cufflinks 1.029        
cufflinks 1.409       High
cufflinks 1.086        

0 Strain