Gene : Glyma.04G210100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13215 - RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR Genomic Order:  2101
Name:  ? Glyma.04G210100 Secondary Identifier:  ? PAC:30488673
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G210100 0.5kb upstream 0.5kb upstream 2494 true Chr04: 48211051-48213544 Glycine max
Glyma.04G210100 0.5kb upstream 0.5kb upstream 500 false Chr04: 48213045-48213544 Glycine max
Glyma.04G210100 0.5kb downstream 0.5kb downstream 2494 true Chr04: 48210551-48213044 Glycine max
Glyma.04G210100 0.5kb downstream 0.5kb downstream 500 false Chr04: 48210551-48211050 Glycine max
Glyma.04G210100 1.0kb upstream 1.0kb upstream 2994 true Chr04: 48211051-48214044 Glycine max
Glyma.04G210100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48213045-48214044 Glycine max
Glyma.04G210100 1.0kb downstream 1.0kb downstream 2994 true Chr04: 48210051-48213044 Glycine max
Glyma.04G210100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48210051-48211050 Glycine max
Glyma.04G210100 2.0kb upstream 2.0kb upstream 3994 true Chr04: 48211051-48215044 Glycine max
Glyma.04G210100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48213045-48215044 Glycine max
Glyma.04G210100 2.0kb downstream 2.0kb downstream 3994 true Chr04: 48209051-48213044 Glycine max
Glyma.04G210100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48209051-48211050 Glycine max
Glyma.04G210100 5.0kb upstream 5.0kb upstream 6994 true Chr04: 48211051-48218044 Glycine max
Glyma.04G210100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48213045-48218044 Glycine max
Glyma.04G210100 5.0kb downstream 5.0kb downstream 6994 true Chr04: 48206051-48213044 Glycine max
Glyma.04G210100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48206051-48211050 Glycine max
Glyma.04G210100 10.0kb upstream 10.0kb upstream 11994 true Chr04: 48211051-48223044 Glycine max
Glyma.04G210100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48213045-48223044 Glycine max
Glyma.04G210100 10.0kb downstream 10.0kb downstream 11994 true Chr04: 48201051-48213044 Glycine max
Glyma.04G210100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48201051-48211050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306902 5265 Fabidae View MSA
124067021 5270 Rosid View MSA
123736875 5271 Pentapetalae View MSA
122796364 5272 Eudicot View MSA
122048027 5273 Angiosperm View MSA
121344440 5274 Embryophyte View MSA
123380043 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55459 0.0 15.6897   Low
cufflinks 12.4262 0.0 45.1068   High
cufflinks 4.76993 0.0 26.0729    
cufflinks 6.58729 0.0 29.2004    
cufflinks 5.37979 0.0 23.9766    
cufflinks 3.36156 0.0 23.4749   Low
cufflinks 7.2026 0.0 28.1274    
cufflinks 4.93192 0.0 25.8828    
cufflinks 5.21382 0.0 26.9766    
cufflinks 3.182        
cufflinks 0.821       Low
cufflinks 6.707        
cufflinks 4.527        
cufflinks 5.218        
cufflinks 1.302       Low
cufflinks 4.805        
cufflinks 1.74        
cufflinks 5.979        
cufflinks 11.316     High High
cufflinks 3.589        
cufflinks 1.116       Low
cufflinks 4.44        
cufflinks 7.918     High High
cufflinks 1.137       Low
cufflinks 4.365        
cufflinks 1.829        

0 Strain