Gene : Glyma.04G207700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  2077
Name:  ? Glyma.04G207700 Secondary Identifier:  ? PAC:30487212
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G207700 0.5kb upstream 0.5kb upstream 5176 true Chr04: 48017195-48022370 Glycine max
Glyma.04G207700 0.5kb upstream 0.5kb upstream 500 false Chr04: 48017195-48017694 Glycine max
Glyma.04G207700 0.5kb downstream 0.5kb downstream 5176 true Chr04: 48017695-48022870 Glycine max
Glyma.04G207700 0.5kb downstream 0.5kb downstream 500 false Chr04: 48022371-48022870 Glycine max
Glyma.04G207700 1.0kb upstream 1.0kb upstream 5676 true Chr04: 48016695-48022370 Glycine max
Glyma.04G207700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48016695-48017694 Glycine max
Glyma.04G207700 1.0kb downstream 1.0kb downstream 5676 true Chr04: 48017695-48023370 Glycine max
Glyma.04G207700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48022371-48023370 Glycine max
Glyma.04G207700 2.0kb upstream 2.0kb upstream 6676 true Chr04: 48015695-48022370 Glycine max
Glyma.04G207700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48015695-48017694 Glycine max
Glyma.04G207700 2.0kb downstream 2.0kb downstream 6676 true Chr04: 48017695-48024370 Glycine max
Glyma.04G207700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48022371-48024370 Glycine max
Glyma.04G207700 5.0kb upstream 5.0kb upstream 9676 true Chr04: 48012695-48022370 Glycine max
Glyma.04G207700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48012695-48017694 Glycine max
Glyma.04G207700 5.0kb downstream 5.0kb downstream 9676 true Chr04: 48017695-48027370 Glycine max
Glyma.04G207700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48022371-48027370 Glycine max
Glyma.04G207700 10.0kb upstream 10.0kb upstream 14676 true Chr04: 48007695-48022370 Glycine max
Glyma.04G207700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48007695-48017694 Glycine max
Glyma.04G207700 10.0kb downstream 10.0kb downstream 14676 true Chr04: 48017695-48032370 Glycine max
Glyma.04G207700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48022371-48032370 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298382 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97745 0.0 13.5486   High
cufflinks 1.00761 0.0 6.54302    
cufflinks 1.71284 0.0 9.26383    
cufflinks 1.80464 0.0 11.2929    
cufflinks 0.781835 0.0 4.10801    
cufflinks 0.406774 0.0 2.40212   Low
cufflinks 1.09335 0.0 7.04086    
cufflinks 3.54466 0.0 15.2995   High
cufflinks 1.71351 0.0 9.30413    
cufflinks 0.242        
cufflinks 0.524        
cufflinks 0.257        
cufflinks 0.063     Low Low
cufflinks 0.042     Low Low
cufflinks 0.282        
cufflinks 0.944        
cufflinks 0.115       Low
cufflinks 0.381        
cufflinks 0.168        
cufflinks 1.526       High
cufflinks 0.794        
cufflinks 1.305       High
cufflinks 0.722        
cufflinks 0.395        
cufflinks 1.256       High
cufflinks 0.325        

0 Strain