Gene : Glyma.04G208400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF02449//PF13364 - Beta-galactosidase (Glyco_hydro_42) // Beta-galactosidase jelly roll domain (BetaGal_dom4_5) Genomic Order:  2084
Name:  ? Glyma.04G208400 Secondary Identifier:  ? PAC:30487965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G208400 0.5kb upstream 0.5kb upstream 10999 true Chr04: 48073995-48084993 Glycine max
Glyma.04G208400 0.5kb upstream 0.5kb upstream 500 false Chr04: 48073995-48074494 Glycine max
Glyma.04G208400 0.5kb downstream 0.5kb downstream 10999 true Chr04: 48074495-48085493 Glycine max
Glyma.04G208400 0.5kb downstream 0.5kb downstream 500 false Chr04: 48084994-48085493 Glycine max
Glyma.04G208400 1.0kb upstream 1.0kb upstream 11499 true Chr04: 48073495-48084993 Glycine max
Glyma.04G208400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48073495-48074494 Glycine max
Glyma.04G208400 1.0kb downstream 1.0kb downstream 11499 true Chr04: 48074495-48085993 Glycine max
Glyma.04G208400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48084994-48085993 Glycine max
Glyma.04G208400 2.0kb upstream 2.0kb upstream 12499 true Chr04: 48072495-48084993 Glycine max
Glyma.04G208400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48072495-48074494 Glycine max
Glyma.04G208400 2.0kb downstream 2.0kb downstream 12499 true Chr04: 48074495-48086993 Glycine max
Glyma.04G208400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48084994-48086993 Glycine max
Glyma.04G208400 5.0kb upstream 5.0kb upstream 15499 true Chr04: 48069495-48084993 Glycine max
Glyma.04G208400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48069495-48074494 Glycine max
Glyma.04G208400 5.0kb downstream 5.0kb downstream 15499 true Chr04: 48074495-48089993 Glycine max
Glyma.04G208400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48084994-48089993 Glycine max
Glyma.04G208400 10.0kb upstream 10.0kb upstream 20499 true Chr04: 48064495-48084993 Glycine max
Glyma.04G208400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48064495-48074494 Glycine max
Glyma.04G208400 10.0kb downstream 10.0kb downstream 20499 true Chr04: 48074495-48094993 Glycine max
Glyma.04G208400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48084994-48094993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308981 5265 Fabidae View MSA
124065839 5270 Rosid View MSA
123737089 5271 Pentapetalae View MSA
122791756 5272 Eudicot View MSA
122045958 5273 Angiosperm View MSA
121310530 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032005 0.0 0.130418 Low Low
cufflinks 0.994476 0.0 5.0389   High
cufflinks 0.144845 0.0 0.732276 Low  
cufflinks 0.578531 0.0 3.2737    
cufflinks 0.303931 0.0 1.49098    
cufflinks 0.207724 0.0 1.04462 Low  
cufflinks 0.141446 0.0 0.708123 Low  
cufflinks 0.283832 0.0 1.40252    
cufflinks 0.27082 0.0 1.71996    
cufflinks 0.044     Low  
cufflinks 0.035     Low  
cufflinks 0.046     Low  
cufflinks 0.028     Low  
cufflinks 0.046     Low  
cufflinks 0.119       High
cufflinks 0.062     Low  
cufflinks 0.036     Low  
cufflinks 0.043     Low  
cufflinks 0.481       High
cufflinks 0.051     Low  
cufflinks 0.035     Low  
cufflinks 0.08     Low  
cufflinks 0.069     Low  
cufflinks 0.024     Low Low
cufflinks 0.063     Low  
cufflinks 0.044     Low  

0 Strain