Gene : Glyma.04G207300 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3487 - TRAPP 20 K subunit Genomic Order:  2073
Name:  ? Glyma.04G207300 Secondary Identifier:  ? PAC:30488879
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G207300 0.5kb upstream 0.5kb upstream 3585 true Chr04: 47995484-47999068 Glycine max
Glyma.04G207300 0.5kb upstream 0.5kb upstream 500 false Chr04: 47995484-47995983 Glycine max
Glyma.04G207300 0.5kb downstream 0.5kb downstream 3585 true Chr04: 47995984-47999568 Glycine max
Glyma.04G207300 0.5kb downstream 0.5kb downstream 500 false Chr04: 47999069-47999568 Glycine max
Glyma.04G207300 1.0kb upstream 1.0kb upstream 4085 true Chr04: 47994984-47999068 Glycine max
Glyma.04G207300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47994984-47995983 Glycine max
Glyma.04G207300 1.0kb downstream 1.0kb downstream 4085 true Chr04: 47995984-48000068 Glycine max
Glyma.04G207300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47999069-48000068 Glycine max
Glyma.04G207300 2.0kb upstream 2.0kb upstream 5085 true Chr04: 47993984-47999068 Glycine max
Glyma.04G207300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47993984-47995983 Glycine max
Glyma.04G207300 2.0kb downstream 2.0kb downstream 5085 true Chr04: 47995984-48001068 Glycine max
Glyma.04G207300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47999069-48001068 Glycine max
Glyma.04G207300 5.0kb upstream 5.0kb upstream 8085 true Chr04: 47990984-47999068 Glycine max
Glyma.04G207300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47990984-47995983 Glycine max
Glyma.04G207300 5.0kb downstream 5.0kb downstream 8085 true Chr04: 47995984-48004068 Glycine max
Glyma.04G207300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47999069-48004068 Glycine max
Glyma.04G207300 10.0kb upstream 10.0kb upstream 13085 true Chr04: 47985984-47999068 Glycine max
Glyma.04G207300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47985984-47995983 Glycine max
Glyma.04G207300 10.0kb downstream 10.0kb downstream 13085 true Chr04: 47995984-48009068 Glycine max
Glyma.04G207300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47999069-48009068 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313980 5265 Fabidae View MSA
124060844 5270 Rosid View MSA
123746210 5271 Pentapetalae View MSA
122790146 5272 Eudicot View MSA
122049402 5273 Angiosperm View MSA
123429051 5275 Viridiplantae View MSA
121344946 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.358 0.0 75.9364    
cufflinks 20.2117 0.0 75.4659 High  
cufflinks 28.6816 0.0 100.605 High  
cufflinks 17.7779 0.0 73.5366   Low
cufflinks 28.8058 0.0 101.656 High  
cufflinks 56.5849 0.0 193.758 High High
cufflinks 22.8088 0.0 83.6035 High  
cufflinks 27.3354 0.0 96.4621 High  
cufflinks 27.2161 0.0 96.0668 High  
cufflinks 3.174        
cufflinks 2.069        
cufflinks 2.716        
cufflinks 4.631       High
cufflinks 4.465       High
cufflinks 1.486       Low
cufflinks 2.504        
cufflinks 2.386        
cufflinks 3.195        
cufflinks 2.622        
cufflinks 2.361        
cufflinks 2.132        
cufflinks 2.453        
cufflinks 2.476        
cufflinks 2.877        
cufflinks 2.46        
cufflinks 2.292        

0 Strain