Gene : Glyma.04G212300 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN Genomic Order:  2123
Name:  ? Glyma.04G212300 Secondary Identifier:  ? PAC:30490952

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G212300 0.5kb upstream 0.5kb upstream 2476 true Chr04: 48412093-48414568 Glycine max
Glyma.04G212300 0.5kb upstream 0.5kb upstream 500 false Chr04: 48412093-48412592 Glycine max
Glyma.04G212300 0.5kb downstream 0.5kb downstream 2476 true Chr04: 48412593-48415068 Glycine max
Glyma.04G212300 0.5kb downstream 0.5kb downstream 500 false Chr04: 48414569-48415068 Glycine max
Glyma.04G212300 1.0kb upstream 1.0kb upstream 2976 true Chr04: 48411593-48414568 Glycine max
Glyma.04G212300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48411593-48412592 Glycine max
Glyma.04G212300 1.0kb downstream 1.0kb downstream 2976 true Chr04: 48412593-48415568 Glycine max
Glyma.04G212300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48414569-48415568 Glycine max
Glyma.04G212300 2.0kb upstream 2.0kb upstream 3976 true Chr04: 48410593-48414568 Glycine max
Glyma.04G212300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48410593-48412592 Glycine max
Glyma.04G212300 2.0kb downstream 2.0kb downstream 3976 true Chr04: 48412593-48416568 Glycine max
Glyma.04G212300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48414569-48416568 Glycine max
Glyma.04G212300 5.0kb upstream 5.0kb upstream 6976 true Chr04: 48407593-48414568 Glycine max
Glyma.04G212300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48407593-48412592 Glycine max
Glyma.04G212300 5.0kb downstream 5.0kb downstream 6976 true Chr04: 48412593-48419568 Glycine max
Glyma.04G212300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48414569-48419568 Glycine max
Glyma.04G212300 10.0kb upstream 10.0kb upstream 11976 true Chr04: 48402593-48414568 Glycine max
Glyma.04G212300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48402593-48412592 Glycine max
Glyma.04G212300 10.0kb downstream 10.0kb downstream 11976 true Chr04: 48412593-48424568 Glycine max
Glyma.04G212300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48414569-48424568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308708 5265 Fabidae View MSA
124070063 5270 Rosid View MSA
123742248 5271 Pentapetalae View MSA
122794681 5272 Eudicot View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48164 0.0 5.03151    
cufflinks 1.74021 0.0 5.77965    
cufflinks 0.647419 0.0 2.34651    
cufflinks 1.7987 0.0 5.93598    
cufflinks 1.29632 0.0 4.46114    
cufflinks 0.511263 0.0 1.88107    
cufflinks 0.300465 0.0 1.13475   Low
cufflinks 9.85945 0.0 26.6652   High
cufflinks 2.261 0.0 7.23463    
cufflinks 1.045       High
cufflinks 0.323        
cufflinks 0.628        
cufflinks 0.795        
cufflinks 0.24       Low
cufflinks 0.236       Low
cufflinks 0.805        
cufflinks 0.345        
cufflinks 0.409        
cufflinks 1.08       High
cufflinks 0.776        
cufflinks 0.209       Low
cufflinks 0.86        
cufflinks 0.892       High
cufflinks 0.473        
cufflinks 0.532        
cufflinks 0.343        

0 Strain