Gene : Glyma.04G218300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR27000:SF220 - PROTEIN BRASSINOSTEROID INSENSITIVE 1 Genomic Order:  2183
Name:  ? Glyma.04G218300 Secondary Identifier:  ? PAC:30487868
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G218300 0.5kb upstream 0.5kb upstream 4744 true Chr04: 48925508-48930251 Glycine max
Glyma.04G218300 0.5kb upstream 0.5kb upstream 500 false Chr04: 48925508-48926007 Glycine max
Glyma.04G218300 0.5kb downstream 0.5kb downstream 4744 true Chr04: 48926008-48930751 Glycine max
Glyma.04G218300 0.5kb downstream 0.5kb downstream 500 false Chr04: 48930252-48930751 Glycine max
Glyma.04G218300 1.0kb upstream 1.0kb upstream 5244 true Chr04: 48925008-48930251 Glycine max
Glyma.04G218300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48925008-48926007 Glycine max
Glyma.04G218300 1.0kb downstream 1.0kb downstream 5244 true Chr04: 48926008-48931251 Glycine max
Glyma.04G218300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48930252-48931251 Glycine max
Glyma.04G218300 2.0kb upstream 2.0kb upstream 6244 true Chr04: 48924008-48930251 Glycine max
Glyma.04G218300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48924008-48926007 Glycine max
Glyma.04G218300 2.0kb downstream 2.0kb downstream 6244 true Chr04: 48926008-48932251 Glycine max
Glyma.04G218300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48930252-48932251 Glycine max
Glyma.04G218300 5.0kb upstream 5.0kb upstream 9244 true Chr04: 48921008-48930251 Glycine max
Glyma.04G218300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48921008-48926007 Glycine max
Glyma.04G218300 5.0kb downstream 5.0kb downstream 9244 true Chr04: 48926008-48935251 Glycine max
Glyma.04G218300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48930252-48935251 Glycine max
Glyma.04G218300 10.0kb upstream 10.0kb upstream 14244 true Chr04: 48916008-48930251 Glycine max
Glyma.04G218300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48916008-48926007 Glycine max
Glyma.04G218300 10.0kb downstream 10.0kb downstream 14244 true Chr04: 48926008-48940251 Glycine max
Glyma.04G218300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48930252-48940251 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310190 5265 Fabidae View MSA
124068647 5270 Rosid View MSA
123750798 5271 Pentapetalae View MSA
122786012 5272 Eudicot View MSA
122051567 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346162 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.69199 0.0 26.0057    
cufflinks 13.2114 0.0 35.977    
cufflinks 23.4758 0.0 67.7023 High High
cufflinks 12.8282 0.0 34.8838    
cufflinks 12.063 0.0 32.7418    
cufflinks 12.9324 0.0 35.2512    
cufflinks 8.06308 0.0 21.5332    
cufflinks 13.1907 0.0 35.9671    
cufflinks 5.91855 0.0 15.8109   Low
cufflinks 13.735     High  
cufflinks 3.665       Low
cufflinks 19.989     High High
cufflinks 12.162     High  
cufflinks 12.021     High  
cufflinks 1.791       Low
cufflinks 14.042     High  
cufflinks 3.433       Low
cufflinks 12.867     High  
cufflinks 14.621     High  
cufflinks 10.615     High  
cufflinks 4.688        
cufflinks 11.616     High  
cufflinks 11.587     High  
cufflinks 5.107        
cufflinks 12.924     High  
cufflinks 6.822     High  

0 Strain