Gene : Glyma.19G176700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  1767
Name:  ? Glyma.19G176700 Secondary Identifier:  ? PAC:30512906
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G176700 0.5kb upstream 0.5kb upstream 3213 true Chr19: 43647633-43650845 Glycine max
Glyma.19G176700 0.5kb upstream 0.5kb upstream 500 false Chr19: 43650346-43650845 Glycine max
Glyma.19G176700 0.5kb downstream 0.5kb downstream 3213 true Chr19: 43647133-43650345 Glycine max
Glyma.19G176700 0.5kb downstream 0.5kb downstream 500 false Chr19: 43647133-43647632 Glycine max
Glyma.19G176700 1.0kb upstream 1.0kb upstream 3713 true Chr19: 43647633-43651345 Glycine max
Glyma.19G176700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43650346-43651345 Glycine max
Glyma.19G176700 1.0kb downstream 1.0kb downstream 3713 true Chr19: 43646633-43650345 Glycine max
Glyma.19G176700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43646633-43647632 Glycine max
Glyma.19G176700 2.0kb upstream 2.0kb upstream 4713 true Chr19: 43647633-43652345 Glycine max
Glyma.19G176700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43650346-43652345 Glycine max
Glyma.19G176700 2.0kb downstream 2.0kb downstream 4713 true Chr19: 43645633-43650345 Glycine max
Glyma.19G176700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43645633-43647632 Glycine max
Glyma.19G176700 5.0kb upstream 5.0kb upstream 7713 true Chr19: 43647633-43655345 Glycine max
Glyma.19G176700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43650346-43655345 Glycine max
Glyma.19G176700 5.0kb downstream 5.0kb downstream 7713 true Chr19: 43642633-43650345 Glycine max
Glyma.19G176700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43642633-43647632 Glycine max
Glyma.19G176700 10.0kb upstream 10.0kb upstream 12713 true Chr19: 43647633-43660345 Glycine max
Glyma.19G176700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43650346-43660345 Glycine max
Glyma.19G176700 10.0kb downstream 10.0kb downstream 12713 true Chr19: 43637633-43650345 Glycine max
Glyma.19G176700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43637633-43647632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308646 5265 Fabidae View MSA
124060926 5270 Rosid View MSA
123742153 5271 Pentapetalae View MSA
122787533 5272 Eudicot View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9613 0.0 72.3655 High  
cufflinks 33.2568 0.0 106.018 High  
cufflinks 27.026 0.0 83.7705 High  
cufflinks 32.0491 0.0 101.603 High  
cufflinks 34.8182 0.0 112.4 High  
cufflinks 14.5563 0.0 44.5463   Low
cufflinks 51.7582 0.0 183.14 High High
cufflinks 29.1979 0.0 94.7668 High  
cufflinks 30.5241 0.0 96.0082 High  
cufflinks 12.378     High  
cufflinks 10.153     High Low
cufflinks 13.279     High  
cufflinks 14.24     High  
cufflinks 18.525     High High
cufflinks 11.712     High  
cufflinks 14.066     High  
cufflinks 12.268     High  
cufflinks 18.587     High High
cufflinks 20.429     High High
cufflinks 13.95     High  
cufflinks 12.354     High  
cufflinks 14.313     High  
cufflinks 16.158     High  
cufflinks 11.969     High  
cufflinks 14.301     High  
cufflinks 11.703     High  

0 Strain