Gene : Glyma.04G215900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11937//PTHR11937:SF247 - ACTIN Genomic Order:  2159
Name:  ? Glyma.04G215900 Secondary Identifier:  ? PAC:30490149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G215900 0.5kb upstream 0.5kb upstream 3398 true Chr04: 48716188-48719585 Glycine max
Glyma.04G215900 0.5kb upstream 0.5kb upstream 500 false Chr04: 48716188-48716687 Glycine max
Glyma.04G215900 0.5kb downstream 0.5kb downstream 3398 true Chr04: 48716688-48720085 Glycine max
Glyma.04G215900 0.5kb downstream 0.5kb downstream 500 false Chr04: 48719586-48720085 Glycine max
Glyma.04G215900 1.0kb upstream 1.0kb upstream 3898 true Chr04: 48715688-48719585 Glycine max
Glyma.04G215900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48715688-48716687 Glycine max
Glyma.04G215900 1.0kb downstream 1.0kb downstream 3898 true Chr04: 48716688-48720585 Glycine max
Glyma.04G215900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48719586-48720585 Glycine max
Glyma.04G215900 2.0kb upstream 2.0kb upstream 4898 true Chr04: 48714688-48719585 Glycine max
Glyma.04G215900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48714688-48716687 Glycine max
Glyma.04G215900 2.0kb downstream 2.0kb downstream 4898 true Chr04: 48716688-48721585 Glycine max
Glyma.04G215900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48719586-48721585 Glycine max
Glyma.04G215900 5.0kb upstream 5.0kb upstream 7898 true Chr04: 48711688-48719585 Glycine max
Glyma.04G215900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48711688-48716687 Glycine max
Glyma.04G215900 5.0kb downstream 5.0kb downstream 7898 true Chr04: 48716688-48724585 Glycine max
Glyma.04G215900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48719586-48724585 Glycine max
Glyma.04G215900 10.0kb upstream 10.0kb upstream 12898 true Chr04: 48706688-48719585 Glycine max
Glyma.04G215900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48706688-48716687 Glycine max
Glyma.04G215900 10.0kb downstream 10.0kb downstream 12898 true Chr04: 48716688-48729585 Glycine max
Glyma.04G215900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48719586-48729585 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309448 5265 Fabidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.3962 0.0 272.124 High Low
cufflinks 288.632 0.0 2209.62 High  
cufflinks 78.8861 0.0 309.215 High Low
cufflinks 376.812 0.0 3592.67 High  
cufflinks 252.411 0.0 1755.75 High  
cufflinks 170.636 0.0 931.875 High  
cufflinks 534.598 0.0 6962.62 High High
cufflinks 283.159 0.0 2179.7 High  
cufflinks 178.501 0.0 1009.18 High  
cufflinks 123.942     High High
cufflinks 8.486     High Low
cufflinks 33.034     High  
cufflinks 86.221     High  
cufflinks 116.665     High High
cufflinks 6.391     High Low
cufflinks 60.77     High  
cufflinks 20.497     High  
cufflinks 44.011     High  
cufflinks 88.357     High High
cufflinks 50.639     High  
cufflinks 14.971     High  
cufflinks 50.958     High  
cufflinks 40.555     High  
cufflinks 10.077     High Low
cufflinks 59.539     High  
cufflinks 18.637     High  

0 Strain