Gene : Glyma.04G215400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23354:SF67 - TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN Genomic Order:  2154
Name:  ? Glyma.04G215400 Secondary Identifier:  ? PAC:30489068
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G215400 0.5kb upstream 0.5kb upstream 5919 true Chr04: 48688059-48693977 Glycine max
Glyma.04G215400 0.5kb upstream 0.5kb upstream 500 false Chr04: 48688059-48688558 Glycine max
Glyma.04G215400 0.5kb downstream 0.5kb downstream 5919 true Chr04: 48688559-48694477 Glycine max
Glyma.04G215400 0.5kb downstream 0.5kb downstream 500 false Chr04: 48693978-48694477 Glycine max
Glyma.04G215400 1.0kb upstream 1.0kb upstream 6419 true Chr04: 48687559-48693977 Glycine max
Glyma.04G215400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48687559-48688558 Glycine max
Glyma.04G215400 1.0kb downstream 1.0kb downstream 6419 true Chr04: 48688559-48694977 Glycine max
Glyma.04G215400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48693978-48694977 Glycine max
Glyma.04G215400 2.0kb upstream 2.0kb upstream 7419 true Chr04: 48686559-48693977 Glycine max
Glyma.04G215400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48686559-48688558 Glycine max
Glyma.04G215400 2.0kb downstream 2.0kb downstream 7419 true Chr04: 48688559-48695977 Glycine max
Glyma.04G215400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48693978-48695977 Glycine max
Glyma.04G215400 5.0kb upstream 5.0kb upstream 10419 true Chr04: 48683559-48693977 Glycine max
Glyma.04G215400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48683559-48688558 Glycine max
Glyma.04G215400 5.0kb downstream 5.0kb downstream 10419 true Chr04: 48688559-48698977 Glycine max
Glyma.04G215400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48693978-48698977 Glycine max
Glyma.04G215400 10.0kb upstream 10.0kb upstream 15419 true Chr04: 48678559-48693977 Glycine max
Glyma.04G215400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48678559-48688558 Glycine max
Glyma.04G215400 10.0kb downstream 10.0kb downstream 15419 true Chr04: 48688559-48703977 Glycine max
Glyma.04G215400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48693978-48703977 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308250 5265 Fabidae View MSA
124061375 5270 Rosid View MSA
123739747 5271 Pentapetalae View MSA
122789164 5272 Eudicot View MSA
122042380 5273 Angiosperm View MSA
121345600 5274 Embryophyte View MSA
123380242 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.70674 0.0 18.0217   Low
cufflinks 10.1586 0.0 27.1031    
cufflinks 18.7589 0.0 51.1976   High
cufflinks 15.6153 0.0 42.1579    
cufflinks 14.2621 0.0 38.3426    
cufflinks 18.7565 0.0 51.1784   High
cufflinks 9.85959 0.0 26.3041    
cufflinks 14.9966 0.0 40.3975    
cufflinks 13.6034 0.0 36.4996    
cufflinks 6.814        
cufflinks 3.722        
cufflinks 10.737     High High
cufflinks 7.321     High  
cufflinks 6.427        
cufflinks 2.748       Low
cufflinks 7.004        
cufflinks 3.45       Low
cufflinks 8.185     High High
cufflinks 7.923     High  
cufflinks 5.613        
cufflinks 3.202       Low
cufflinks 5.759        
cufflinks 4.708        
cufflinks 2.783       Low
cufflinks 5.538        
cufflinks 6.301     High  

0 Strain