Gene : Glyma.04G221300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  2213
Name:  ? Glyma.04G221300 Secondary Identifier:  ? PAC:30487492
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-6854 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G221300 0.5kb upstream 0.5kb upstream 4256 true Chr04: 49208393-49212648 Glycine max
Glyma.04G221300 0.5kb upstream 0.5kb upstream 500 false Chr04: 49208393-49208892 Glycine max
Glyma.04G221300 0.5kb downstream 0.5kb downstream 4256 true Chr04: 49208893-49213148 Glycine max
Glyma.04G221300 0.5kb downstream 0.5kb downstream 500 false Chr04: 49212649-49213148 Glycine max
Glyma.04G221300 1.0kb upstream 1.0kb upstream 4756 true Chr04: 49207893-49212648 Glycine max
Glyma.04G221300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49207893-49208892 Glycine max
Glyma.04G221300 1.0kb downstream 1.0kb downstream 4756 true Chr04: 49208893-49213648 Glycine max
Glyma.04G221300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49212649-49213648 Glycine max
Glyma.04G221300 2.0kb upstream 2.0kb upstream 5756 true Chr04: 49206893-49212648 Glycine max
Glyma.04G221300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49206893-49208892 Glycine max
Glyma.04G221300 2.0kb downstream 2.0kb downstream 5756 true Chr04: 49208893-49214648 Glycine max
Glyma.04G221300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49212649-49214648 Glycine max
Glyma.04G221300 5.0kb upstream 5.0kb upstream 8756 true Chr04: 49203893-49212648 Glycine max
Glyma.04G221300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49203893-49208892 Glycine max
Glyma.04G221300 5.0kb downstream 5.0kb downstream 8756 true Chr04: 49208893-49217648 Glycine max
Glyma.04G221300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49212649-49217648 Glycine max
Glyma.04G221300 10.0kb upstream 10.0kb upstream 13756 true Chr04: 49198893-49212648 Glycine max
Glyma.04G221300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49198893-49208892 Glycine max
Glyma.04G221300 10.0kb downstream 10.0kb downstream 13756 true Chr04: 49208893-49222648 Glycine max
Glyma.04G221300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49212649-49222648 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306026 5265 Fabidae View MSA
124073146 5270 Rosid View MSA
123736738 5271 Pentapetalae View MSA
122792658 5272 Eudicot View MSA
122050195 5273 Angiosperm View MSA
121345064 5274 Embryophyte View MSA
123426666 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.7348 0.0 334.349 High  
cufflinks 96.384 0.0 511.987 High  
cufflinks 48.8185 0.0 149.001 High Low
cufflinks 82.4577 0.0 421.533 High  
cufflinks 103.463 0.0 547.546 High  
cufflinks 97.1999 0.0 522.175 High  
cufflinks 140.208 0.0 773.435 High High
cufflinks 73.173 0.0 365.184 High  
cufflinks 76.8851 0.0 251.725 High  
cufflinks 14.129     High High
cufflinks 3.324       Low
cufflinks 8.102     High  
cufflinks 16.809     High High
cufflinks 14.09     High High
cufflinks 3.267       Low
cufflinks 8.084     High  
cufflinks 6.888     High  
cufflinks 9.739     High  
cufflinks 13.038     High High
cufflinks 6.055        
cufflinks 6.177     High  
cufflinks 6.853        
cufflinks 7.38        
cufflinks 4.5       Low
cufflinks 6.798        
cufflinks 8.053     High  

0 Strain