Gene : Glyma.04G219500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  2195
Name:  ? Glyma.04G219500 Secondary Identifier:  ? PAC:30489666
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6724 Glycine max pathologic  
Gmax PWY-7238 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G219500 0.5kb upstream 0.5kb upstream 6033 true Chr04: 49027221-49033253 Glycine max
Glyma.04G219500 0.5kb upstream 0.5kb upstream 500 false Chr04: 49032754-49033253 Glycine max
Glyma.04G219500 0.5kb downstream 0.5kb downstream 6033 true Chr04: 49026721-49032753 Glycine max
Glyma.04G219500 0.5kb downstream 0.5kb downstream 500 false Chr04: 49026721-49027220 Glycine max
Glyma.04G219500 1.0kb upstream 1.0kb upstream 6533 true Chr04: 49027221-49033753 Glycine max
Glyma.04G219500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49032754-49033753 Glycine max
Glyma.04G219500 1.0kb downstream 1.0kb downstream 6533 true Chr04: 49026221-49032753 Glycine max
Glyma.04G219500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49026221-49027220 Glycine max
Glyma.04G219500 2.0kb upstream 2.0kb upstream 7533 true Chr04: 49027221-49034753 Glycine max
Glyma.04G219500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49032754-49034753 Glycine max
Glyma.04G219500 2.0kb downstream 2.0kb downstream 7533 true Chr04: 49025221-49032753 Glycine max
Glyma.04G219500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49025221-49027220 Glycine max
Glyma.04G219500 5.0kb upstream 5.0kb upstream 10533 true Chr04: 49027221-49037753 Glycine max
Glyma.04G219500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49032754-49037753 Glycine max
Glyma.04G219500 5.0kb downstream 5.0kb downstream 10533 true Chr04: 49022221-49032753 Glycine max
Glyma.04G219500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49022221-49027220 Glycine max
Glyma.04G219500 10.0kb upstream 10.0kb upstream 15533 true Chr04: 49027221-49042753 Glycine max
Glyma.04G219500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49032754-49042753 Glycine max
Glyma.04G219500 10.0kb downstream 10.0kb downstream 15533 true Chr04: 49017221-49032753 Glycine max
Glyma.04G219500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49017221-49027220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308920 5265 Fabidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.25748 0.0 14.6136    
cufflinks 12.908 0.0 34.4372   High
cufflinks 3.9707 0.0 11.3534   Low
cufflinks 11.8936 0.0 31.7423    
cufflinks 9.19439 0.0 24.6722    
cufflinks 5.14768 0.0 14.3192   Low
cufflinks 12.9898 0.0 34.6551   High
cufflinks 10.3915 0.0 27.7966    
cufflinks 7.34138 0.0 19.9047    
cufflinks 4.073        
cufflinks 0.504       Low
cufflinks 3.014        
cufflinks 3.63        
cufflinks 4.546        
cufflinks 1.295        
cufflinks 5.294        
cufflinks 1.187        
cufflinks 4.57        
cufflinks 7.218       High
cufflinks 4.808        
cufflinks 0.944       Low
cufflinks 4.933        
cufflinks 5.296        
cufflinks 0.718       Low
cufflinks 4.6        
cufflinks 0.997       Low

0 Strain