Gene : Glyma.04G221700 G. max Wm82.a2.v1
Defline:  (1 of 3) PF05349 - GATA-type transcription activator, N-terminal (GATA-N) Genomic Order:  2217
Name:  ? Glyma.04G221700 Secondary Identifier:  ? PAC:30490257
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G221700 0.5kb upstream 0.5kb upstream 1925 true Chr04: 49244392-49246316 Glycine max
Glyma.04G221700 0.5kb upstream 0.5kb upstream 500 false Chr04: 49244392-49244891 Glycine max
Glyma.04G221700 0.5kb downstream 0.5kb downstream 1925 true Chr04: 49244892-49246816 Glycine max
Glyma.04G221700 0.5kb downstream 0.5kb downstream 500 false Chr04: 49246317-49246816 Glycine max
Glyma.04G221700 1.0kb upstream 1.0kb upstream 2425 true Chr04: 49243892-49246316 Glycine max
Glyma.04G221700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49243892-49244891 Glycine max
Glyma.04G221700 1.0kb downstream 1.0kb downstream 2425 true Chr04: 49244892-49247316 Glycine max
Glyma.04G221700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49246317-49247316 Glycine max
Glyma.04G221700 2.0kb upstream 2.0kb upstream 3425 true Chr04: 49242892-49246316 Glycine max
Glyma.04G221700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49242892-49244891 Glycine max
Glyma.04G221700 2.0kb downstream 2.0kb downstream 3425 true Chr04: 49244892-49248316 Glycine max
Glyma.04G221700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49246317-49248316 Glycine max
Glyma.04G221700 5.0kb upstream 5.0kb upstream 6425 true Chr04: 49239892-49246316 Glycine max
Glyma.04G221700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49239892-49244891 Glycine max
Glyma.04G221700 5.0kb downstream 5.0kb downstream 6425 true Chr04: 49244892-49251316 Glycine max
Glyma.04G221700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49246317-49251316 Glycine max
Glyma.04G221700 10.0kb upstream 10.0kb upstream 11425 true Chr04: 49234892-49246316 Glycine max
Glyma.04G221700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49234892-49244891 Glycine max
Glyma.04G221700 10.0kb downstream 10.0kb downstream 11425 true Chr04: 49244892-49256316 Glycine max
Glyma.04G221700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49246317-49256316 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305707 5265 Fabidae View MSA
124064334 5270 Rosid View MSA
123739882 5271 Pentapetalae View MSA
122793420 5272 Eudicot View MSA
122047977 5273 Angiosperm View MSA
121345112 5274 Embryophyte View MSA
123425556 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 134.719 0.0 402.359 High High
cufflinks 0.614142 0.0 2.31025    
cufflinks 0.569129 0.0 2.14191    
cufflinks 1.16268 0.0 4.22469    
cufflinks 0.0371931 0.0 0.160597 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.288868 0.0 1.12355    
cufflinks 0.359903 0.0 1.38476    
cufflinks 0.0870502 0.0 0.354645 Low  
cufflinks 0.256        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.948        
cufflinks 0.312        
cufflinks 0.047     Low Low
cufflinks 0.014     Low Low
cufflinks 1.757        
cufflinks 0.013     Low Low
cufflinks 0.856        
cufflinks 0.541        
cufflinks 0.459        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.641        
cufflinks 4.105       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.33        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain