Gene : Glyma.04G227400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  2274
Name:  ? Glyma.04G227400 Secondary Identifier:  ? PAC:30488431
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G227400 0.5kb upstream 0.5kb upstream 3093 true Chr04: 49692001-49695093 Glycine max
Glyma.04G227400 0.5kb upstream 0.5kb upstream 500 false Chr04: 49694594-49695093 Glycine max
Glyma.04G227400 0.5kb downstream 0.5kb downstream 3093 true Chr04: 49691501-49694593 Glycine max
Glyma.04G227400 0.5kb downstream 0.5kb downstream 500 false Chr04: 49691501-49692000 Glycine max
Glyma.04G227400 1.0kb upstream 1.0kb upstream 3593 true Chr04: 49692001-49695593 Glycine max
Glyma.04G227400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49694594-49695593 Glycine max
Glyma.04G227400 1.0kb downstream 1.0kb downstream 3593 true Chr04: 49691001-49694593 Glycine max
Glyma.04G227400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49691001-49692000 Glycine max
Glyma.04G227400 2.0kb upstream 2.0kb upstream 4593 true Chr04: 49692001-49696593 Glycine max
Glyma.04G227400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49694594-49696593 Glycine max
Glyma.04G227400 2.0kb downstream 2.0kb downstream 4593 true Chr04: 49690001-49694593 Glycine max
Glyma.04G227400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49690001-49692000 Glycine max
Glyma.04G227400 5.0kb upstream 5.0kb upstream 7593 true Chr04: 49692001-49699593 Glycine max
Glyma.04G227400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49694594-49699593 Glycine max
Glyma.04G227400 5.0kb downstream 5.0kb downstream 7593 true Chr04: 49687001-49694593 Glycine max
Glyma.04G227400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49687001-49692000 Glycine max
Glyma.04G227400 10.0kb upstream 10.0kb upstream 12593 true Chr04: 49692001-49704593 Glycine max
Glyma.04G227400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49694594-49704593 Glycine max
Glyma.04G227400 10.0kb downstream 10.0kb downstream 12593 true Chr04: 49682001-49694593 Glycine max
Glyma.04G227400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49682001-49692000 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313080 5265 Fabidae View MSA
124062483 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.6633 0.0 148.451 High  
cufflinks 73.7827 0.0 210.918 High  
cufflinks 40.8134 0.0 110.522 High Low
cufflinks 57.1862 0.0 159.123 High  
cufflinks 93.0804 0.0 275.077 High High
cufflinks 79.1299 0.0 228.231 High  
cufflinks 75.64 0.0 216.617 High  
cufflinks 61.1104 0.0 171.474 High  
cufflinks 74.7323 0.0 214.07 High  
cufflinks 24.218     High  
cufflinks 16.505     High Low
cufflinks 25.549     High  
cufflinks 57.002     High High
cufflinks 69.662     High High
cufflinks 17.399     High Low
cufflinks 34.764     High  
cufflinks 19.959     High  
cufflinks 21.569     High  
cufflinks 29.521     High  
cufflinks 35.687     High  
cufflinks 18.859     High  
cufflinks 31.087     High  
cufflinks 34.728     High  
cufflinks 16.69     High Low
cufflinks 33.531     High  
cufflinks 22.797     High  

0 Strain