Gene : Glyma.04G226600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF103 - PEPTIDASE M20 FAMILY MEMBER Genomic Order:  2266
Name:  ? Glyma.04G226600 Secondary Identifier:  ? PAC:30488041
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G226600 0.5kb upstream 0.5kb upstream 5784 true Chr04: 49617121-49622904 Glycine max
Glyma.04G226600 0.5kb upstream 0.5kb upstream 500 false Chr04: 49622405-49622904 Glycine max
Glyma.04G226600 0.5kb downstream 0.5kb downstream 5784 true Chr04: 49616621-49622404 Glycine max
Glyma.04G226600 0.5kb downstream 0.5kb downstream 500 false Chr04: 49616621-49617120 Glycine max
Glyma.04G226600 1.0kb upstream 1.0kb upstream 6284 true Chr04: 49617121-49623404 Glycine max
Glyma.04G226600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49622405-49623404 Glycine max
Glyma.04G226600 1.0kb downstream 1.0kb downstream 6284 true Chr04: 49616121-49622404 Glycine max
Glyma.04G226600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49616121-49617120 Glycine max
Glyma.04G226600 2.0kb upstream 2.0kb upstream 7284 true Chr04: 49617121-49624404 Glycine max
Glyma.04G226600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49622405-49624404 Glycine max
Glyma.04G226600 2.0kb downstream 2.0kb downstream 7284 true Chr04: 49615121-49622404 Glycine max
Glyma.04G226600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49615121-49617120 Glycine max
Glyma.04G226600 5.0kb upstream 5.0kb upstream 10284 true Chr04: 49617121-49627404 Glycine max
Glyma.04G226600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49622405-49627404 Glycine max
Glyma.04G226600 5.0kb downstream 5.0kb downstream 10284 true Chr04: 49612121-49622404 Glycine max
Glyma.04G226600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49612121-49617120 Glycine max
Glyma.04G226600 10.0kb upstream 10.0kb upstream 15284 true Chr04: 49617121-49632404 Glycine max
Glyma.04G226600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49622405-49632404 Glycine max
Glyma.04G226600 10.0kb downstream 10.0kb downstream 15284 true Chr04: 49607121-49622404 Glycine max
Glyma.04G226600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49607121-49617120 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312528 5265 Fabidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5741 0.0 33.8427   High
cufflinks 4.68118 0.0 13.7926    
cufflinks 4.74248 0.0 13.886    
cufflinks 5.72856 0.0 16.4146    
cufflinks 2.19807 0.0 7.19251   Low
cufflinks 3.17037 0.0 9.84904    
cufflinks 4.13364 0.0 12.3657    
cufflinks 4.31809 0.0 12.8276    
cufflinks 2.796 0.0 8.84625    
cufflinks 1.796        
cufflinks 0.626        
cufflinks 1.81        
cufflinks 0.543        
cufflinks 0.212       Low
cufflinks 0.21       Low
cufflinks 5.033       High
cufflinks 0.517        
cufflinks 1.542        
cufflinks 1.975        
cufflinks 7.183     High High
cufflinks 0.647        
cufflinks 5.932       High
cufflinks 3.554        
cufflinks 1.064        
cufflinks 6.199       High
cufflinks 0.627        

0 Strain