Gene : Glyma.04G172800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1728
Name:  ? Glyma.04G172800 Secondary Identifier:  ? PAC:30487631
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY66-422 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G172800 0.5kb upstream 0.5kb upstream 2657 true Chr04: 43248564-43251220 Glycine max
Glyma.04G172800 0.5kb upstream 0.5kb upstream 500 false Chr04: 43250721-43251220 Glycine max
Glyma.04G172800 0.5kb downstream 0.5kb downstream 2657 true Chr04: 43248064-43250720 Glycine max
Glyma.04G172800 0.5kb downstream 0.5kb downstream 500 false Chr04: 43248064-43248563 Glycine max
Glyma.04G172800 1.0kb upstream 1.0kb upstream 3157 true Chr04: 43248564-43251720 Glycine max
Glyma.04G172800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43250721-43251720 Glycine max
Glyma.04G172800 1.0kb downstream 1.0kb downstream 3157 true Chr04: 43247564-43250720 Glycine max
Glyma.04G172800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43247564-43248563 Glycine max
Glyma.04G172800 2.0kb upstream 2.0kb upstream 4157 true Chr04: 43248564-43252720 Glycine max
Glyma.04G172800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43250721-43252720 Glycine max
Glyma.04G172800 2.0kb downstream 2.0kb downstream 4157 true Chr04: 43246564-43250720 Glycine max
Glyma.04G172800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43246564-43248563 Glycine max
Glyma.04G172800 5.0kb upstream 5.0kb upstream 7157 true Chr04: 43248564-43255720 Glycine max
Glyma.04G172800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43250721-43255720 Glycine max
Glyma.04G172800 5.0kb downstream 5.0kb downstream 7157 true Chr04: 43243564-43250720 Glycine max
Glyma.04G172800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43243564-43248563 Glycine max
Glyma.04G172800 10.0kb upstream 10.0kb upstream 12157 true Chr04: 43248564-43260720 Glycine max
Glyma.04G172800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43250721-43260720 Glycine max
Glyma.04G172800 10.0kb downstream 10.0kb downstream 12157 true Chr04: 43238564-43250720 Glycine max
Glyma.04G172800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43238564-43248563 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308782 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0162534 0.0 0.0737095 Low Low
cufflinks 0.581494 0.0 2.16199    
cufflinks 0.152853 0.0 0.602399 Low  
cufflinks 0.128469 0.0 0.509773 Low  
cufflinks 0.87669 0.0 3.19561    
cufflinks 1.14185 0.0 4.0906   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0829593 0.0 0.334564 Low  
cufflinks 0.039     Low  
cufflinks 0.034     Low  
cufflinks 0.668       High
cufflinks 0.35       High
cufflinks 0.277        
cufflinks 0.009     Low  
cufflinks 0.015     Low  
cufflinks 0.009     Low  
cufflinks 3.475       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.019     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.01     Low  
cufflinks 0.032     Low  

0 Strain