Gene : Glyma.04G170800 G. max Wm82.a2.v1
Genomic Order:  1708 Name:  ? Glyma.04G170800
Secondary Identifier:  ? PAC:30489109
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G170800 0.5kb upstream 0.5kb upstream 1742 true Chr04: 42761224-42762965 Glycine max
Glyma.04G170800 0.5kb upstream 0.5kb upstream 500 false Chr04: 42762466-42762965 Glycine max
Glyma.04G170800 0.5kb downstream 0.5kb downstream 1742 true Chr04: 42760724-42762465 Glycine max
Glyma.04G170800 0.5kb downstream 0.5kb downstream 500 false Chr04: 42760724-42761223 Glycine max
Glyma.04G170800 1.0kb upstream 1.0kb upstream 2242 true Chr04: 42761224-42763465 Glycine max
Glyma.04G170800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42762466-42763465 Glycine max
Glyma.04G170800 1.0kb downstream 1.0kb downstream 2242 true Chr04: 42760224-42762465 Glycine max
Glyma.04G170800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42760224-42761223 Glycine max
Glyma.04G170800 2.0kb upstream 2.0kb upstream 3242 true Chr04: 42761224-42764465 Glycine max
Glyma.04G170800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42762466-42764465 Glycine max
Glyma.04G170800 2.0kb downstream 2.0kb downstream 3242 true Chr04: 42759224-42762465 Glycine max
Glyma.04G170800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42759224-42761223 Glycine max
Glyma.04G170800 5.0kb upstream 5.0kb upstream 6242 true Chr04: 42761224-42767465 Glycine max
Glyma.04G170800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42762466-42767465 Glycine max
Glyma.04G170800 5.0kb downstream 5.0kb downstream 6242 true Chr04: 42756224-42762465 Glycine max
Glyma.04G170800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42756224-42761223 Glycine max
Glyma.04G170800 10.0kb upstream 10.0kb upstream 11242 true Chr04: 42761224-42772465 Glycine max
Glyma.04G170800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42762466-42772465 Glycine max
Glyma.04G170800 10.0kb downstream 10.0kb downstream 11242 true Chr04: 42751224-42762465 Glycine max
Glyma.04G170800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42751224-42761223 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250472 5265 Fabidae View MSA
124039433 5270 Rosid View MSA
123753580 5271 Pentapetalae View MSA
122795891 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.209736 0.0 0.837692 Low  
cufflinks 0.0468137 0.0 0.204842 Low  
cufflinks 0.0815149 0.0 0.34017 Low  
cufflinks 0.00858617 0.0 0.044669 Low Low
cufflinks 0.12406 0.0 0.506222 Low  
cufflinks 0.316332 0.0 1.24413    
cufflinks 0.420828 0.0 1.63697   High
cufflinks 0.0791865 0.0 0.331791 Low  
cufflinks 0.148663 0.0 0.601216 Low  
cufflinks 0.057     Low  
cufflinks 0.014     Low Low
cufflinks 0.023     Low Low
cufflinks 0.192       High
cufflinks 0.167       High
cufflinks 0.029     Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.08     Low  
cufflinks 0.071     Low  
cufflinks 0.037     Low  
cufflinks 0.126        
cufflinks 0.145       High
cufflinks 0.016     Low Low
cufflinks 0.08     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain