Gene : Glyma.04G167500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10438:SF263 - THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC Genomic Order:  1675
Name:  ? Glyma.04G167500 Secondary Identifier:  ? PAC:30489324
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G167500 0.5kb upstream 0.5kb upstream 2360 true Chr04: 42054360-42056719 Glycine max
Glyma.04G167500 0.5kb upstream 0.5kb upstream 500 false Chr04: 42054360-42054859 Glycine max
Glyma.04G167500 0.5kb downstream 0.5kb downstream 2360 true Chr04: 42054860-42057219 Glycine max
Glyma.04G167500 0.5kb downstream 0.5kb downstream 500 false Chr04: 42056720-42057219 Glycine max
Glyma.04G167500 1.0kb upstream 1.0kb upstream 2860 true Chr04: 42053860-42056719 Glycine max
Glyma.04G167500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42053860-42054859 Glycine max
Glyma.04G167500 1.0kb downstream 1.0kb downstream 2860 true Chr04: 42054860-42057719 Glycine max
Glyma.04G167500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42056720-42057719 Glycine max
Glyma.04G167500 2.0kb upstream 2.0kb upstream 3860 true Chr04: 42052860-42056719 Glycine max
Glyma.04G167500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42052860-42054859 Glycine max
Glyma.04G167500 2.0kb downstream 2.0kb downstream 3860 true Chr04: 42054860-42058719 Glycine max
Glyma.04G167500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42056720-42058719 Glycine max
Glyma.04G167500 5.0kb upstream 5.0kb upstream 6860 true Chr04: 42049860-42056719 Glycine max
Glyma.04G167500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42049860-42054859 Glycine max
Glyma.04G167500 5.0kb downstream 5.0kb downstream 6860 true Chr04: 42054860-42061719 Glycine max
Glyma.04G167500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42056720-42061719 Glycine max
Glyma.04G167500 10.0kb upstream 10.0kb upstream 11860 true Chr04: 42044860-42056719 Glycine max
Glyma.04G167500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42044860-42054859 Glycine max
Glyma.04G167500 10.0kb downstream 10.0kb downstream 11860 true Chr04: 42054860-42066719 Glycine max
Glyma.04G167500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42056720-42066719 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305608 5265 Fabidae View MSA
124069337 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.84748 0.0 9.28635   High
cufflinks 1.05013 0.0 3.7745    
cufflinks 0.672791 0.0 2.48086   Low
cufflinks 1.19473 0.0 4.25307    
cufflinks 1.33582 0.0 4.72746    
cufflinks 2.4581 0.0 8.15077   High
cufflinks 0.723589 0.0 2.66381   Low
cufflinks 0.706129 0.0 2.59991   Low
cufflinks 1.85867 0.0 6.3744    
cufflinks 1.805       Low
cufflinks 149.746     High High
cufflinks 2.993        
cufflinks 3.632        
cufflinks 4.371        
cufflinks 89.802     High High
cufflinks 9.676     High  
cufflinks 18.06     High  
cufflinks 7.712     High  
cufflinks 1.981       Low
cufflinks 5.85        
cufflinks 108.607     High High
cufflinks 2.91        
cufflinks 1.338       Low
cufflinks 67.485     High High
cufflinks 8.549     High  
cufflinks 87.182     High High

0 Strain