Gene : Glyma.04G178100 G. max Wm82.a2.v1
Defline:  (1 of 6) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  1781
Name:  ? Glyma.04G178100 Secondary Identifier:  ? PAC:30490687
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G178100 0.5kb upstream 0.5kb upstream 2234 true Chr04: 44241683-44243916 Glycine max
Glyma.04G178100 0.5kb upstream 0.5kb upstream 500 false Chr04: 44241683-44242182 Glycine max
Glyma.04G178100 0.5kb downstream 0.5kb downstream 2234 true Chr04: 44242183-44244416 Glycine max
Glyma.04G178100 0.5kb downstream 0.5kb downstream 500 false Chr04: 44243917-44244416 Glycine max
Glyma.04G178100 1.0kb upstream 1.0kb upstream 2734 true Chr04: 44241183-44243916 Glycine max
Glyma.04G178100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44241183-44242182 Glycine max
Glyma.04G178100 1.0kb downstream 1.0kb downstream 2734 true Chr04: 44242183-44244916 Glycine max
Glyma.04G178100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44243917-44244916 Glycine max
Glyma.04G178100 2.0kb upstream 2.0kb upstream 3734 true Chr04: 44240183-44243916 Glycine max
Glyma.04G178100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44240183-44242182 Glycine max
Glyma.04G178100 2.0kb downstream 2.0kb downstream 3734 true Chr04: 44242183-44245916 Glycine max
Glyma.04G178100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44243917-44245916 Glycine max
Glyma.04G178100 5.0kb upstream 5.0kb upstream 6734 true Chr04: 44237183-44243916 Glycine max
Glyma.04G178100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44237183-44242182 Glycine max
Glyma.04G178100 5.0kb downstream 5.0kb downstream 6734 true Chr04: 44242183-44248916 Glycine max
Glyma.04G178100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44243917-44248916 Glycine max
Glyma.04G178100 10.0kb upstream 10.0kb upstream 11734 true Chr04: 44232183-44243916 Glycine max
Glyma.04G178100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44232183-44242182 Glycine max
Glyma.04G178100 10.0kb downstream 10.0kb downstream 11734 true Chr04: 44242183-44253916 Glycine max
Glyma.04G178100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44243917-44253916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314388 5265 Fabidae View MSA
124070084 5270 Rosid View MSA
123746560 5271 Pentapetalae View MSA
122794120 5272 Eudicot View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.147 0.0 274.813 High  
cufflinks 110.739 0.0 306.61 High  
cufflinks 118.61 0.0 330.293 High  
cufflinks 91.4744 0.0 249.632 High  
cufflinks 247.746 0.0 766.344 High  
cufflinks 1054.49 0.0 4750.15 High High
cufflinks 121.923 0.0 341.01 High  
cufflinks 162.283 0.0 470.034 High  
cufflinks 198.815 0.0 592.333 High  
cufflinks 40.996     High  
cufflinks 75.741     High High
cufflinks 28.05     High  
cufflinks 90.229     High High
cufflinks 74.435     High High
cufflinks 17.897     High Low
cufflinks 24.49     High  
cufflinks 56.446     High  
cufflinks 35.93     High  
cufflinks 30.332     High  
cufflinks 21.705     High Low
cufflinks 74.162     High High
cufflinks 22.803     High Low
cufflinks 23.492     High  
cufflinks 75.665     High High
cufflinks 23.678     High  
cufflinks 67.14     High  

0 Strain