Gene : Glyma.04G176400 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.1.5.2 - Quinoprotein glucose dehydrogenase (PQQ, quinone) / Quinoprotein D-glucose dehydrogenase Genomic Order:  1764
Name:  ? Glyma.04G176400 Secondary Identifier:  ? PAC:30489412
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCOSE1PMETAB-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G176400 0.5kb upstream 0.5kb upstream 5027 true Chr04: 43926857-43931883 Glycine max
Glyma.04G176400 0.5kb upstream 0.5kb upstream 500 false Chr04: 43926857-43927356 Glycine max
Glyma.04G176400 0.5kb downstream 0.5kb downstream 5027 true Chr04: 43927357-43932383 Glycine max
Glyma.04G176400 0.5kb downstream 0.5kb downstream 500 false Chr04: 43931884-43932383 Glycine max
Glyma.04G176400 1.0kb upstream 1.0kb upstream 5527 true Chr04: 43926357-43931883 Glycine max
Glyma.04G176400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43926357-43927356 Glycine max
Glyma.04G176400 1.0kb downstream 1.0kb downstream 5527 true Chr04: 43927357-43932883 Glycine max
Glyma.04G176400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43931884-43932883 Glycine max
Glyma.04G176400 2.0kb upstream 2.0kb upstream 6527 true Chr04: 43925357-43931883 Glycine max
Glyma.04G176400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43925357-43927356 Glycine max
Glyma.04G176400 2.0kb downstream 2.0kb downstream 6527 true Chr04: 43927357-43933883 Glycine max
Glyma.04G176400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43931884-43933883 Glycine max
Glyma.04G176400 5.0kb upstream 5.0kb upstream 9527 true Chr04: 43922357-43931883 Glycine max
Glyma.04G176400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43922357-43927356 Glycine max
Glyma.04G176400 5.0kb downstream 5.0kb downstream 9527 true Chr04: 43927357-43936883 Glycine max
Glyma.04G176400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43931884-43936883 Glycine max
Glyma.04G176400 10.0kb upstream 10.0kb upstream 14527 true Chr04: 43917357-43931883 Glycine max
Glyma.04G176400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43917357-43927356 Glycine max
Glyma.04G176400 10.0kb downstream 10.0kb downstream 14527 true Chr04: 43927357-43941883 Glycine max
Glyma.04G176400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43931884-43941883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302882 5265 Fabidae View MSA
124061288 5270 Rosid View MSA
123749936 5271 Pentapetalae View MSA
122794140 5272 Eudicot View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59125 0.0 18.2134    
cufflinks 11.7531 0.0 31.4653    
cufflinks 4.69157 0.0 13.3736    
cufflinks 1.66882 0.0 5.49018   Low
cufflinks 17.3805 0.0 46.4094    
cufflinks 115.032 0.0 383.211 High High
cufflinks 4.7067 0.0 13.4708    
cufflinks 3.09544 0.0 9.32668    
cufflinks 25.9761 0.0 70.3971 High  
cufflinks 3.672        
cufflinks 12.026     High  
cufflinks 2.819       Low
cufflinks 29.681     High High
cufflinks 12.373     High  
cufflinks 4.595        
cufflinks 4.446        
cufflinks 13.472     High  
cufflinks 3.003       Low
cufflinks 8.003     High  
cufflinks 4.038        
cufflinks 18.852     High High
cufflinks 5.045        
cufflinks 6.798        
cufflinks 9.661     High  
cufflinks 3.879        
cufflinks 12.503     High  

0 Strain