Gene : Glyma.04G177000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23407 - ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE Genomic Order:  1770
Name:  ? Glyma.04G177000 Secondary Identifier:  ? PAC:30489239
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G177000 0.5kb upstream 0.5kb upstream 4786 true Chr04: 44030501-44035286 Glycine max
Glyma.04G177000 0.5kb upstream 0.5kb upstream 500 false Chr04: 44034787-44035286 Glycine max
Glyma.04G177000 0.5kb downstream 0.5kb downstream 4786 true Chr04: 44030001-44034786 Glycine max
Glyma.04G177000 0.5kb downstream 0.5kb downstream 500 false Chr04: 44030001-44030500 Glycine max
Glyma.04G177000 1.0kb upstream 1.0kb upstream 5286 true Chr04: 44030501-44035786 Glycine max
Glyma.04G177000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44034787-44035786 Glycine max
Glyma.04G177000 1.0kb downstream 1.0kb downstream 5286 true Chr04: 44029501-44034786 Glycine max
Glyma.04G177000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44029501-44030500 Glycine max
Glyma.04G177000 2.0kb upstream 2.0kb upstream 6286 true Chr04: 44030501-44036786 Glycine max
Glyma.04G177000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44034787-44036786 Glycine max
Glyma.04G177000 2.0kb downstream 2.0kb downstream 6286 true Chr04: 44028501-44034786 Glycine max
Glyma.04G177000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44028501-44030500 Glycine max
Glyma.04G177000 5.0kb upstream 5.0kb upstream 9286 true Chr04: 44030501-44039786 Glycine max
Glyma.04G177000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44034787-44039786 Glycine max
Glyma.04G177000 5.0kb downstream 5.0kb downstream 9286 true Chr04: 44025501-44034786 Glycine max
Glyma.04G177000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44025501-44030500 Glycine max
Glyma.04G177000 10.0kb upstream 10.0kb upstream 14286 true Chr04: 44030501-44044786 Glycine max
Glyma.04G177000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44034787-44044786 Glycine max
Glyma.04G177000 10.0kb downstream 10.0kb downstream 14286 true Chr04: 44020501-44034786 Glycine max
Glyma.04G177000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44020501-44030500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041034 5273 Angiosperm View MSA
122301910 5265 Fabidae View MSA
124060507 5270 Rosid View MSA
123750943 5271 Pentapetalae View MSA
122792422 5272 Eudicot View MSA
121347096 5274 Embryophyte View MSA
123424141 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.20301 0.0 15.4435    
cufflinks 5.43034 0.0 16.0041   High
cufflinks 4.48422 0.0 13.5211    
cufflinks 3.77994 0.0 11.701   Low
cufflinks 5.3242 0.0 15.7255   High
cufflinks 5.01512 0.0 14.9297    
cufflinks 4.14549 0.0 12.7135   Low
cufflinks 4.55183 0.0 13.7352    
cufflinks 4.53756 0.0 13.6929    
cufflinks 1.362        
cufflinks 0.748       Low
cufflinks 1.726        
cufflinks 1.555        
cufflinks 1.815        
cufflinks 1.292        
cufflinks 1.457        
cufflinks 0.617       Low
cufflinks 1.869       High
cufflinks 2.036       High
cufflinks 1.446        
cufflinks 0.813       Low
cufflinks 1.53        
cufflinks 1.688        
cufflinks 1.026        
cufflinks 1.286        
cufflinks 0.972        

0 Strain