Gene : Glyma.19G170100 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.1.1//1.1.1.284//1.2.1.1 - Alcohol dehydrogenase / Aldehyde reductase // S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase Genomic Order:  1701
Name:  ? Glyma.19G170100 Secondary Identifier:  ? PAC:30512288
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1801 Glycine max pathologic  
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6333 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6802 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G170100 0.5kb upstream 0.5kb upstream 3737 true Chr19: 43081671-43085407 Glycine max
Glyma.19G170100 0.5kb upstream 0.5kb upstream 500 false Chr19: 43084908-43085407 Glycine max
Glyma.19G170100 0.5kb downstream 0.5kb downstream 3737 true Chr19: 43081171-43084907 Glycine max
Glyma.19G170100 0.5kb downstream 0.5kb downstream 500 false Chr19: 43081171-43081670 Glycine max
Glyma.19G170100 1.0kb upstream 1.0kb upstream 4237 true Chr19: 43081671-43085907 Glycine max
Glyma.19G170100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43084908-43085907 Glycine max
Glyma.19G170100 1.0kb downstream 1.0kb downstream 4237 true Chr19: 43080671-43084907 Glycine max
Glyma.19G170100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43080671-43081670 Glycine max
Glyma.19G170100 2.0kb upstream 2.0kb upstream 5237 true Chr19: 43081671-43086907 Glycine max
Glyma.19G170100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43084908-43086907 Glycine max
Glyma.19G170100 2.0kb downstream 2.0kb downstream 5237 true Chr19: 43079671-43084907 Glycine max
Glyma.19G170100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43079671-43081670 Glycine max
Glyma.19G170100 5.0kb upstream 5.0kb upstream 8237 true Chr19: 43081671-43089907 Glycine max
Glyma.19G170100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43084908-43089907 Glycine max
Glyma.19G170100 5.0kb downstream 5.0kb downstream 8237 true Chr19: 43076671-43084907 Glycine max
Glyma.19G170100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43076671-43081670 Glycine max
Glyma.19G170100 10.0kb upstream 10.0kb upstream 13237 true Chr19: 43081671-43094907 Glycine max
Glyma.19G170100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43084908-43094907 Glycine max
Glyma.19G170100 10.0kb downstream 10.0kb downstream 13237 true Chr19: 43071671-43084907 Glycine max
Glyma.19G170100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43071671-43081670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310391 5265 Fabidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6093 0.0 88.8581 High  
cufflinks 80.7811 0.0 244.75 High  
cufflinks 30.8085 0.0 83.7643 High  
cufflinks 88.5918 0.0 272.782 High High
cufflinks 41.8653 0.0 116.48 High  
cufflinks 28.1527 0.0 76.0914 High  
cufflinks 111.91 0.0 360.209 High High
cufflinks 51.195 0.0 145.789 High  
cufflinks 22.914 0.0 61.393 High Low
cufflinks 42.281     High  
cufflinks 2.36       Low
cufflinks 28.769     High  
cufflinks 29.769     High  
cufflinks 34.51     High  
cufflinks 1.434       Low
cufflinks 32.678     High  
cufflinks 9.978     High  
cufflinks 31.204     High  
cufflinks 57.387     High High
cufflinks 27.943     High  
cufflinks 5.395       Low
cufflinks 29.246     High  
cufflinks 34.361     High  
cufflinks 4.639       Low
cufflinks 30.714     High  
cufflinks 8.552     High  

0 Strain