Gene : Glyma.19G170300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  1703
Name:  ? Glyma.19G170300 Secondary Identifier:  ? PAC:30511202
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G170300 0.5kb upstream 0.5kb upstream 8215 true Chr19: 43100795-43109009 Glycine max
Glyma.19G170300 0.5kb upstream 0.5kb upstream 500 false Chr19: 43108510-43109009 Glycine max
Glyma.19G170300 0.5kb downstream 0.5kb downstream 8215 true Chr19: 43100295-43108509 Glycine max
Glyma.19G170300 0.5kb downstream 0.5kb downstream 500 false Chr19: 43100295-43100794 Glycine max
Glyma.19G170300 1.0kb upstream 1.0kb upstream 8715 true Chr19: 43100795-43109509 Glycine max
Glyma.19G170300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43108510-43109509 Glycine max
Glyma.19G170300 1.0kb downstream 1.0kb downstream 8715 true Chr19: 43099795-43108509 Glycine max
Glyma.19G170300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43099795-43100794 Glycine max
Glyma.19G170300 2.0kb upstream 2.0kb upstream 9715 true Chr19: 43100795-43110509 Glycine max
Glyma.19G170300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43108510-43110509 Glycine max
Glyma.19G170300 2.0kb downstream 2.0kb downstream 9715 true Chr19: 43098795-43108509 Glycine max
Glyma.19G170300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43098795-43100794 Glycine max
Glyma.19G170300 5.0kb upstream 5.0kb upstream 12715 true Chr19: 43100795-43113509 Glycine max
Glyma.19G170300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43108510-43113509 Glycine max
Glyma.19G170300 5.0kb downstream 5.0kb downstream 12715 true Chr19: 43095795-43108509 Glycine max
Glyma.19G170300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43095795-43100794 Glycine max
Glyma.19G170300 10.0kb upstream 10.0kb upstream 17715 true Chr19: 43100795-43118509 Glycine max
Glyma.19G170300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43108510-43118509 Glycine max
Glyma.19G170300 10.0kb downstream 10.0kb downstream 17715 true Chr19: 43090795-43108509 Glycine max
Glyma.19G170300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43090795-43100794 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304136 5265 Fabidae View MSA
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.3272 0.0 165.83 High  
cufflinks 21.1149 0.0 84.2417 High Low
cufflinks 51.8932 0.0 276.84 High High
cufflinks 25.4906 0.0 118.016 High  
cufflinks 28.3214 0.0 120.047 High  
cufflinks 28.5393 0.0 136.791 High  
cufflinks 36.7897 0.0 228.979 High  
cufflinks 25.4051 0.0 127.982 High  
cufflinks 20.9399 0.0 83.639 High Low
cufflinks 2.197        
cufflinks 3.432       High
cufflinks 2.278        
cufflinks 2.232        
cufflinks 2.173        
cufflinks 2.209        
cufflinks 2.089        
cufflinks 3.126       High
cufflinks 1.848       Low
cufflinks 2.148        
cufflinks 2.182        
cufflinks 2.823        
cufflinks 2.239        
cufflinks 1.629       Low
cufflinks 3.573       High
cufflinks 1.972        
cufflinks 3.167       High

0 Strain