Gene : Glyma.04G182000 G. max Wm82.a2.v1
Defline:  (1 of 5) PF12014 - Domain of unknown function (DUF3506) (DUF3506) Genomic Order:  1820
Name:  ? Glyma.04G182000 Secondary Identifier:  ? PAC:30489042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G182000 0.5kb upstream 0.5kb upstream 6247 true Chr04: 44813809-44820055 Glycine max
Glyma.04G182000 0.5kb upstream 0.5kb upstream 500 false Chr04: 44819556-44820055 Glycine max
Glyma.04G182000 0.5kb downstream 0.5kb downstream 6247 true Chr04: 44813309-44819555 Glycine max
Glyma.04G182000 0.5kb downstream 0.5kb downstream 500 false Chr04: 44813309-44813808 Glycine max
Glyma.04G182000 1.0kb upstream 1.0kb upstream 6747 true Chr04: 44813809-44820555 Glycine max
Glyma.04G182000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44819556-44820555 Glycine max
Glyma.04G182000 1.0kb downstream 1.0kb downstream 6747 true Chr04: 44812809-44819555 Glycine max
Glyma.04G182000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44812809-44813808 Glycine max
Glyma.04G182000 2.0kb upstream 2.0kb upstream 7747 true Chr04: 44813809-44821555 Glycine max
Glyma.04G182000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44819556-44821555 Glycine max
Glyma.04G182000 2.0kb downstream 2.0kb downstream 7747 true Chr04: 44811809-44819555 Glycine max
Glyma.04G182000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44811809-44813808 Glycine max
Glyma.04G182000 5.0kb upstream 5.0kb upstream 10747 true Chr04: 44813809-44824555 Glycine max
Glyma.04G182000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44819556-44824555 Glycine max
Glyma.04G182000 5.0kb downstream 5.0kb downstream 10747 true Chr04: 44808809-44819555 Glycine max
Glyma.04G182000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44808809-44813808 Glycine max
Glyma.04G182000 10.0kb upstream 10.0kb upstream 15747 true Chr04: 44813809-44829555 Glycine max
Glyma.04G182000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44819556-44829555 Glycine max
Glyma.04G182000 10.0kb downstream 10.0kb downstream 15747 true Chr04: 44803809-44819555 Glycine max
Glyma.04G182000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44803809-44813808 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303990 5265 Fabidae View MSA
124067530 5270 Rosid View MSA
123737338 5271 Pentapetalae View MSA
122786783 5272 Eudicot View MSA
122043193 5273 Angiosperm View MSA
121347827 5274 Embryophyte View MSA
123425558 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1105 0.0 51.5488   High
cufflinks 13.0098 0.0 34.7183    
cufflinks 10.051 0.0 26.8513    
cufflinks 11.0357 0.0 29.4513    
cufflinks 8.37083 0.0 22.4898    
cufflinks 7.59802 0.0 20.4922    
cufflinks 12.4075 0.0 33.1017    
cufflinks 6.46591 0.0 17.5819   Low
cufflinks 9.90656 0.0 26.4831    
cufflinks 3.633        
cufflinks 6.897     High  
cufflinks 5.419        
cufflinks 3.32       Low
cufflinks 2.79       Low
cufflinks 5.907     High  
cufflinks 10.03     High High
cufflinks 2.241       Low
cufflinks 5.18        
cufflinks 6.671        
cufflinks 12.741     High High
cufflinks 6.88     High  
cufflinks 10.201     High High
cufflinks 7.826     High  
cufflinks 6.795     High  
cufflinks 10.782     High High
cufflinks 4.127        

0 Strain