Gene : Glyma.04G179100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12878 - NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT Genomic Order:  1791
Name:  ? Glyma.04G179100 Secondary Identifier:  ? PAC:30488480
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G179100 0.5kb upstream 0.5kb upstream 9257 true Chr04: 44398109-44407365 Glycine max
Glyma.04G179100 0.5kb upstream 0.5kb upstream 500 false Chr04: 44406866-44407365 Glycine max
Glyma.04G179100 0.5kb downstream 0.5kb downstream 9257 true Chr04: 44397609-44406865 Glycine max
Glyma.04G179100 0.5kb downstream 0.5kb downstream 500 false Chr04: 44397609-44398108 Glycine max
Glyma.04G179100 1.0kb upstream 1.0kb upstream 9757 true Chr04: 44398109-44407865 Glycine max
Glyma.04G179100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44406866-44407865 Glycine max
Glyma.04G179100 1.0kb downstream 1.0kb downstream 9757 true Chr04: 44397109-44406865 Glycine max
Glyma.04G179100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44397109-44398108 Glycine max
Glyma.04G179100 2.0kb upstream 2.0kb upstream 10757 true Chr04: 44398109-44408865 Glycine max
Glyma.04G179100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44406866-44408865 Glycine max
Glyma.04G179100 2.0kb downstream 2.0kb downstream 10757 true Chr04: 44396109-44406865 Glycine max
Glyma.04G179100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44396109-44398108 Glycine max
Glyma.04G179100 5.0kb upstream 5.0kb upstream 13757 true Chr04: 44398109-44411865 Glycine max
Glyma.04G179100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44406866-44411865 Glycine max
Glyma.04G179100 5.0kb downstream 5.0kb downstream 13757 true Chr04: 44393109-44406865 Glycine max
Glyma.04G179100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44393109-44398108 Glycine max
Glyma.04G179100 10.0kb upstream 10.0kb upstream 18757 true Chr04: 44398109-44416865 Glycine max
Glyma.04G179100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44406866-44416865 Glycine max
Glyma.04G179100 10.0kb downstream 10.0kb downstream 18757 true Chr04: 44388109-44406865 Glycine max
Glyma.04G179100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44388109-44398108 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300407 5265 Fabidae View MSA
124068436 5270 Rosid View MSA
123739674 5271 Pentapetalae View MSA
122788526 5272 Eudicot View MSA
122045134 5273 Angiosperm View MSA
121343920 5274 Embryophyte View MSA
123424630 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.3504 0.0 169.515 High  
cufflinks 70.3619 0.0 189.079 High  
cufflinks 48.8427 0.0 130.317 High Low
cufflinks 52.4344 0.0 139.959 High  
cufflinks 77.6424 0.0 209.479 High  
cufflinks 107.091 0.0 295.447 High High
cufflinks 49.9874 0.0 133.363 High Low
cufflinks 60.015 0.0 160.562 High  
cufflinks 77.4185 0.0 209.134 High  
cufflinks 7.223       High
cufflinks 3.473       Low
cufflinks 4.443        
cufflinks 8.432     High High
cufflinks 8.133     High High
cufflinks 3.52       Low
cufflinks 4.347        
cufflinks 3.444       Low
cufflinks 6.813       High
cufflinks 5.22        
cufflinks 4.122        
cufflinks 3.704        
cufflinks 4.446        
cufflinks 4.814        
cufflinks 4.157        
cufflinks 5.007        
cufflinks 4.723        

0 Strain