Gene : Glyma.19G170900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21726//PTHR21726:SF36 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  1709
Name:  ? Glyma.19G170900 Secondary Identifier:  ? PAC:30514216
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G170900 0.5kb upstream 0.5kb upstream 6201 true Chr19: 43217344-43223544 Glycine max
Glyma.19G170900 0.5kb upstream 0.5kb upstream 500 false Chr19: 43217344-43217843 Glycine max
Glyma.19G170900 0.5kb downstream 0.5kb downstream 6201 true Chr19: 43217844-43224044 Glycine max
Glyma.19G170900 0.5kb downstream 0.5kb downstream 500 false Chr19: 43223545-43224044 Glycine max
Glyma.19G170900 1.0kb upstream 1.0kb upstream 6701 true Chr19: 43216844-43223544 Glycine max
Glyma.19G170900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43216844-43217843 Glycine max
Glyma.19G170900 1.0kb downstream 1.0kb downstream 6701 true Chr19: 43217844-43224544 Glycine max
Glyma.19G170900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43223545-43224544 Glycine max
Glyma.19G170900 2.0kb upstream 2.0kb upstream 7701 true Chr19: 43215844-43223544 Glycine max
Glyma.19G170900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43215844-43217843 Glycine max
Glyma.19G170900 2.0kb downstream 2.0kb downstream 7701 true Chr19: 43217844-43225544 Glycine max
Glyma.19G170900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43223545-43225544 Glycine max
Glyma.19G170900 5.0kb upstream 5.0kb upstream 10701 true Chr19: 43212844-43223544 Glycine max
Glyma.19G170900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43212844-43217843 Glycine max
Glyma.19G170900 5.0kb downstream 5.0kb downstream 10701 true Chr19: 43217844-43228544 Glycine max
Glyma.19G170900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43223545-43228544 Glycine max
Glyma.19G170900 10.0kb upstream 10.0kb upstream 15701 true Chr19: 43207844-43223544 Glycine max
Glyma.19G170900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43207844-43217843 Glycine max
Glyma.19G170900 10.0kb downstream 10.0kb downstream 15701 true Chr19: 43217844-43233544 Glycine max
Glyma.19G170900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43223545-43233544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299216 5265 Fabidae View MSA
124066440 5270 Rosid View MSA
123749692 5271 Pentapetalae View MSA
122785930 5272 Eudicot View MSA
122041731 5273 Angiosperm View MSA
121309884 5274 Embryophyte View MSA
123347522 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.84178 0.0 29.6239    
cufflinks 13.5944 0.0 41.0702   High
cufflinks 9.43677 0.0 28.7814   Low
cufflinks 10.9076 0.0 32.8187    
cufflinks 11.1317 0.0 33.0041    
cufflinks 12.1002 0.0 41.7909    
cufflinks 10.5181 0.0 31.8422    
cufflinks 16.0358 0.0 50.9323   High
cufflinks 10.1907 0.0 30.9225    
cufflinks 7.554        
cufflinks 5.993     High  
cufflinks 5.337        
cufflinks 6.322        
cufflinks 5.905        
cufflinks 2.667       Low
cufflinks 9.641     High High
cufflinks 3.182       Low
cufflinks 7.392     High  
cufflinks 6.442        
cufflinks 9.536     High High
cufflinks 4.887        
cufflinks 9.468     High High
cufflinks 7.142        
cufflinks 5.172        
cufflinks 8.311     High  
cufflinks 4.614        

0 Strain