Gene : Glyma.19G171500 G. max Wm82.a2.v1
Defline:  (1 of 56) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  1715
Name:  ? Glyma.19G171500 Secondary Identifier:  ? PAC:30514237
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G171500 0.5kb upstream 0.5kb upstream 3248 true Chr19: 43280269-43283516 Glycine max
Glyma.19G171500 0.5kb upstream 0.5kb upstream 500 false Chr19: 43280269-43280768 Glycine max
Glyma.19G171500 0.5kb downstream 0.5kb downstream 3248 true Chr19: 43280769-43284016 Glycine max
Glyma.19G171500 0.5kb downstream 0.5kb downstream 500 false Chr19: 43283517-43284016 Glycine max
Glyma.19G171500 1.0kb upstream 1.0kb upstream 3748 true Chr19: 43279769-43283516 Glycine max
Glyma.19G171500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43279769-43280768 Glycine max
Glyma.19G171500 1.0kb downstream 1.0kb downstream 3748 true Chr19: 43280769-43284516 Glycine max
Glyma.19G171500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43283517-43284516 Glycine max
Glyma.19G171500 2.0kb upstream 2.0kb upstream 4748 true Chr19: 43278769-43283516 Glycine max
Glyma.19G171500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43278769-43280768 Glycine max
Glyma.19G171500 2.0kb downstream 2.0kb downstream 4748 true Chr19: 43280769-43285516 Glycine max
Glyma.19G171500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43283517-43285516 Glycine max
Glyma.19G171500 5.0kb upstream 5.0kb upstream 7748 true Chr19: 43275769-43283516 Glycine max
Glyma.19G171500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43275769-43280768 Glycine max
Glyma.19G171500 5.0kb downstream 5.0kb downstream 7748 true Chr19: 43280769-43288516 Glycine max
Glyma.19G171500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43283517-43288516 Glycine max
Glyma.19G171500 10.0kb upstream 10.0kb upstream 12748 true Chr19: 43270769-43283516 Glycine max
Glyma.19G171500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43270769-43280768 Glycine max
Glyma.19G171500 10.0kb downstream 10.0kb downstream 12748 true Chr19: 43280769-43293516 Glycine max
Glyma.19G171500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43283517-43293516 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312825 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0259241 0.0 0.117242 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0472439 0.0 0.20214 Low  
cufflinks 0.0403635 0.0 0.174837 Low  
cufflinks 0.021073 0.0 0.0968131 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0219981 0.0 0.100756 Low  
cufflinks 0.0488432 0.0 0.208277 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  

0 Strain