Gene : Glyma.04G192100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12506:SF20 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Genomic Order:  1921
Name:  ? Glyma.04G192100 Secondary Identifier:  ? PAC:30487885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G192100 0.5kb upstream 0.5kb upstream 6226 true Chr04: 46306959-46313184 Glycine max
Glyma.04G192100 0.5kb upstream 0.5kb upstream 500 false Chr04: 46306959-46307458 Glycine max
Glyma.04G192100 0.5kb downstream 0.5kb downstream 6226 true Chr04: 46307459-46313684 Glycine max
Glyma.04G192100 0.5kb downstream 0.5kb downstream 500 false Chr04: 46313185-46313684 Glycine max
Glyma.04G192100 1.0kb upstream 1.0kb upstream 6726 true Chr04: 46306459-46313184 Glycine max
Glyma.04G192100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46306459-46307458 Glycine max
Glyma.04G192100 1.0kb downstream 1.0kb downstream 6726 true Chr04: 46307459-46314184 Glycine max
Glyma.04G192100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46313185-46314184 Glycine max
Glyma.04G192100 2.0kb upstream 2.0kb upstream 7726 true Chr04: 46305459-46313184 Glycine max
Glyma.04G192100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46305459-46307458 Glycine max
Glyma.04G192100 2.0kb downstream 2.0kb downstream 7726 true Chr04: 46307459-46315184 Glycine max
Glyma.04G192100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46313185-46315184 Glycine max
Glyma.04G192100 5.0kb upstream 5.0kb upstream 10726 true Chr04: 46302459-46313184 Glycine max
Glyma.04G192100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46302459-46307458 Glycine max
Glyma.04G192100 5.0kb downstream 5.0kb downstream 10726 true Chr04: 46307459-46318184 Glycine max
Glyma.04G192100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46313185-46318184 Glycine max
Glyma.04G192100 10.0kb upstream 10.0kb upstream 15726 true Chr04: 46297459-46313184 Glycine max
Glyma.04G192100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46297459-46307458 Glycine max
Glyma.04G192100 10.0kb downstream 10.0kb downstream 15726 true Chr04: 46307459-46323184 Glycine max
Glyma.04G192100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46313185-46323184 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315095 5265 Fabidae View MSA
124063047 5270 Rosid View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6436 0.0 36.4075    
cufflinks 14.8714 0.0 39.6751    
cufflinks 20.3713 0.0 54.6986 High High
cufflinks 17.2692 0.0 46.15    
cufflinks 15.9404 0.0 42.5411    
cufflinks 12.1106 0.0 32.3662   Low
cufflinks 14.1949 0.0 37.8727    
cufflinks 21.6531 0.0 58.2426 High High
cufflinks 13.2614 0.0 35.3983    
cufflinks 8.551     High  
cufflinks 7.358     High  
cufflinks 9.463     High  
cufflinks 8.044     High  
cufflinks 10.14     High High
cufflinks 7.075     High  
cufflinks 7.051        
cufflinks 5.94       Low
cufflinks 8.821     High  
cufflinks 10.287     High High
cufflinks 7.132     High  
cufflinks 8.862     High  
cufflinks 8.662     High  
cufflinks 5.733       Low
cufflinks 10.532     High High
cufflinks 7.287     High  
cufflinks 8.103     High  

0 Strain