Gene : Glyma.04G192000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10694:SF38 - LYSINE-SPECIFIC DEMETHYLASE REF6 Genomic Order:  1920
Name:  ? Glyma.04G192000 Secondary Identifier:  ? PAC:30487133
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G192000 0.5kb upstream 0.5kb upstream 18739 true Chr04: 46279239-46297977 Glycine max
Glyma.04G192000 0.5kb upstream 0.5kb upstream 500 false Chr04: 46297478-46297977 Glycine max
Glyma.04G192000 0.5kb downstream 0.5kb downstream 18739 true Chr04: 46278739-46297477 Glycine max
Glyma.04G192000 0.5kb downstream 0.5kb downstream 500 false Chr04: 46278739-46279238 Glycine max
Glyma.04G192000 1.0kb upstream 1.0kb upstream 19239 true Chr04: 46279239-46298477 Glycine max
Glyma.04G192000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46297478-46298477 Glycine max
Glyma.04G192000 1.0kb downstream 1.0kb downstream 19239 true Chr04: 46278239-46297477 Glycine max
Glyma.04G192000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46278239-46279238 Glycine max
Glyma.04G192000 2.0kb upstream 2.0kb upstream 20239 true Chr04: 46279239-46299477 Glycine max
Glyma.04G192000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46297478-46299477 Glycine max
Glyma.04G192000 2.0kb downstream 2.0kb downstream 20239 true Chr04: 46277239-46297477 Glycine max
Glyma.04G192000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46277239-46279238 Glycine max
Glyma.04G192000 5.0kb upstream 5.0kb upstream 23239 true Chr04: 46279239-46302477 Glycine max
Glyma.04G192000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46297478-46302477 Glycine max
Glyma.04G192000 5.0kb downstream 5.0kb downstream 23239 true Chr04: 46274239-46297477 Glycine max
Glyma.04G192000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46274239-46279238 Glycine max
Glyma.04G192000 10.0kb upstream 10.0kb upstream 28239 true Chr04: 46279239-46307477 Glycine max
Glyma.04G192000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46297478-46307477 Glycine max
Glyma.04G192000 10.0kb downstream 10.0kb downstream 28239 true Chr04: 46269239-46297477 Glycine max
Glyma.04G192000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46269239-46279238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314341 5265 Fabidae View MSA
124060683 5270 Rosid View MSA
123752621 5271 Pentapetalae View MSA
122794300 5272 Eudicot View MSA
122042363 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121351254 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.81895 0.0 19.6908    
cufflinks 7.79274 0.0 40.1873   High
cufflinks 2.40978 0.0 12.4878   Low
cufflinks 5.63734 0.0 31.3219    
cufflinks 4.25823 0.0 20.7109    
cufflinks 1.83582 0.0 9.14853   Low
cufflinks 5.95198 0.0 32.3202    
cufflinks 4.35877 0.0 22.558    
cufflinks 4.36493 0.0 21.8494    
cufflinks 0.541        
cufflinks 0.064       Low
cufflinks 0.591        
cufflinks 0.629        
cufflinks 0.699        
cufflinks 0.163        
cufflinks 0.838        
cufflinks 0.163        
cufflinks 0.875        
cufflinks 1.236       High
cufflinks 0.77        
cufflinks 0.115       Low
cufflinks 0.899        
cufflinks 0.975        
cufflinks 0.086       Low
cufflinks 0.787        
cufflinks 0.152        

0 Strain