Gene : Glyma.04G195300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  1953
Name:  ? Glyma.04G195300 Secondary Identifier:  ? PAC:30491061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G195300 0.5kb upstream 0.5kb upstream 4097 true Chr04: 46719962-46724058 Glycine max
Glyma.04G195300 0.5kb upstream 0.5kb upstream 500 false Chr04: 46719962-46720461 Glycine max
Glyma.04G195300 0.5kb downstream 0.5kb downstream 4097 true Chr04: 46720462-46724558 Glycine max
Glyma.04G195300 0.5kb downstream 0.5kb downstream 500 false Chr04: 46724059-46724558 Glycine max
Glyma.04G195300 1.0kb upstream 1.0kb upstream 4597 true Chr04: 46719462-46724058 Glycine max
Glyma.04G195300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46719462-46720461 Glycine max
Glyma.04G195300 1.0kb downstream 1.0kb downstream 4597 true Chr04: 46720462-46725058 Glycine max
Glyma.04G195300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46724059-46725058 Glycine max
Glyma.04G195300 2.0kb upstream 2.0kb upstream 5597 true Chr04: 46718462-46724058 Glycine max
Glyma.04G195300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46718462-46720461 Glycine max
Glyma.04G195300 2.0kb downstream 2.0kb downstream 5597 true Chr04: 46720462-46726058 Glycine max
Glyma.04G195300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46724059-46726058 Glycine max
Glyma.04G195300 5.0kb upstream 5.0kb upstream 8597 true Chr04: 46715462-46724058 Glycine max
Glyma.04G195300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46715462-46720461 Glycine max
Glyma.04G195300 5.0kb downstream 5.0kb downstream 8597 true Chr04: 46720462-46729058 Glycine max
Glyma.04G195300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46724059-46729058 Glycine max
Glyma.04G195300 10.0kb upstream 10.0kb upstream 13597 true Chr04: 46710462-46724058 Glycine max
Glyma.04G195300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46710462-46720461 Glycine max
Glyma.04G195300 10.0kb downstream 10.0kb downstream 13597 true Chr04: 46720462-46734058 Glycine max
Glyma.04G195300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46724059-46734058 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314205 5265 Fabidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4351 0.0 127.737 High High
cufflinks 7.63482 0.0 21.0287    
cufflinks 25.1837 0.0 67.8777 High  
cufflinks 1.1038 0.0 3.84957   Low
cufflinks 8.42929 0.0 23.0664    
cufflinks 15.4549 0.0 41.25    
cufflinks 9.70402 0.0 26.3148    
cufflinks 4.26453 0.0 12.4735    
cufflinks 13.032 0.0 34.8846    
cufflinks 1.567       Low
cufflinks 95.717     High High
cufflinks 8.247     High  
cufflinks 2.967       Low
cufflinks 3.208       Low
cufflinks 83.121     High High
cufflinks 15.868     High  
cufflinks 3.947        
cufflinks 2.088       Low
cufflinks 7.65     High  
cufflinks 37.249     High  
cufflinks 88.072     High High
cufflinks 17.623     High  
cufflinks 4.926        
cufflinks 80.691     High High
cufflinks 27.77     High  
cufflinks 35.434     High  

0 Strain