Gene : Glyma.04G196100 G. max Wm82.a2.v1
Defline:  (1 of 7) 2.2.1.6 - Acetolactate synthase / Alpha-acetolactate synthetase Genomic Order:  1961
Name:  ? Glyma.04G196100 Secondary Identifier:  ? PAC:30488669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax VALSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G196100 0.5kb upstream 0.5kb upstream 2457 true Chr04: 46792064-46794520 Glycine max
Glyma.04G196100 0.5kb upstream 0.5kb upstream 500 false Chr04: 46794021-46794520 Glycine max
Glyma.04G196100 0.5kb downstream 0.5kb downstream 2457 true Chr04: 46791564-46794020 Glycine max
Glyma.04G196100 0.5kb downstream 0.5kb downstream 500 false Chr04: 46791564-46792063 Glycine max
Glyma.04G196100 1.0kb upstream 1.0kb upstream 2957 true Chr04: 46792064-46795020 Glycine max
Glyma.04G196100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46794021-46795020 Glycine max
Glyma.04G196100 1.0kb downstream 1.0kb downstream 2957 true Chr04: 46791064-46794020 Glycine max
Glyma.04G196100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46791064-46792063 Glycine max
Glyma.04G196100 2.0kb upstream 2.0kb upstream 3957 true Chr04: 46792064-46796020 Glycine max
Glyma.04G196100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46794021-46796020 Glycine max
Glyma.04G196100 2.0kb downstream 2.0kb downstream 3957 true Chr04: 46790064-46794020 Glycine max
Glyma.04G196100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46790064-46792063 Glycine max
Glyma.04G196100 5.0kb upstream 5.0kb upstream 6957 true Chr04: 46792064-46799020 Glycine max
Glyma.04G196100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46794021-46799020 Glycine max
Glyma.04G196100 5.0kb downstream 5.0kb downstream 6957 true Chr04: 46787064-46794020 Glycine max
Glyma.04G196100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46787064-46792063 Glycine max
Glyma.04G196100 10.0kb upstream 10.0kb upstream 11957 true Chr04: 46792064-46804020 Glycine max
Glyma.04G196100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46794021-46804020 Glycine max
Glyma.04G196100 10.0kb downstream 10.0kb downstream 11957 true Chr04: 46782064-46794020 Glycine max
Glyma.04G196100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46782064-46792063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297223 5265 Fabidae View MSA
124061754 5270 Rosid View MSA
123740157 5271 Pentapetalae View MSA
122787294 5272 Eudicot View MSA
122042643 5273 Angiosperm View MSA
121346996 5274 Embryophyte View MSA
123424213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3927 0.0 43.7379    
cufflinks 20.1894 0.0 53.9843 High  
cufflinks 4.62702 0.0 13.4158   Low
cufflinks 12.9145 0.0 34.5444    
cufflinks 15.2111 0.0 40.5819    
cufflinks 11.2714 0.0 30.2286    
cufflinks 28.5469 0.0 77.776 High High
cufflinks 9.91363 0.0 26.7626    
cufflinks 7.5189 0.0 20.6102    
cufflinks 12.818     High  
cufflinks 0.401       Low
cufflinks 11.082     High  
cufflinks 14.092     High  
cufflinks 15.837     High  
cufflinks 0.594       Low
cufflinks 22.598     High  
cufflinks 1.165        
cufflinks 11.197     High  
cufflinks 28.752     High High
cufflinks 13.123     High  
cufflinks 0.728       Low
cufflinks 19.835     High  
cufflinks 26.669     High  
cufflinks 0.594       Low
cufflinks 19.092     High  
cufflinks 1.168        

0 Strain