Gene : Glyma.04G194500 G. max Wm82.a2.v1
Defline:  (1 of 2) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  1945
Name:  ? Glyma.04G194500 Secondary Identifier:  ? PAC:30488972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G194500 0.5kb upstream 0.5kb upstream 6013 true Chr04: 46615006-46621018 Glycine max
Glyma.04G194500 0.5kb upstream 0.5kb upstream 500 false Chr04: 46615006-46615505 Glycine max
Glyma.04G194500 0.5kb downstream 0.5kb downstream 6013 true Chr04: 46615506-46621518 Glycine max
Glyma.04G194500 0.5kb downstream 0.5kb downstream 500 false Chr04: 46621019-46621518 Glycine max
Glyma.04G194500 1.0kb upstream 1.0kb upstream 6513 true Chr04: 46614506-46621018 Glycine max
Glyma.04G194500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46614506-46615505 Glycine max
Glyma.04G194500 1.0kb downstream 1.0kb downstream 6513 true Chr04: 46615506-46622018 Glycine max
Glyma.04G194500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46621019-46622018 Glycine max
Glyma.04G194500 2.0kb upstream 2.0kb upstream 7513 true Chr04: 46613506-46621018 Glycine max
Glyma.04G194500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46613506-46615505 Glycine max
Glyma.04G194500 2.0kb downstream 2.0kb downstream 7513 true Chr04: 46615506-46623018 Glycine max
Glyma.04G194500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46621019-46623018 Glycine max
Glyma.04G194500 5.0kb upstream 5.0kb upstream 10513 true Chr04: 46610506-46621018 Glycine max
Glyma.04G194500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46610506-46615505 Glycine max
Glyma.04G194500 5.0kb downstream 5.0kb downstream 10513 true Chr04: 46615506-46626018 Glycine max
Glyma.04G194500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46621019-46626018 Glycine max
Glyma.04G194500 10.0kb upstream 10.0kb upstream 15513 true Chr04: 46605506-46621018 Glycine max
Glyma.04G194500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46605506-46615505 Glycine max
Glyma.04G194500 10.0kb downstream 10.0kb downstream 15513 true Chr04: 46615506-46631018 Glycine max
Glyma.04G194500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46621019-46631018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300790 5265 Fabidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.84285 0.0 21.6075   Low
cufflinks 14.2966 0.0 54.5211    
cufflinks 7.26735 0.0 32.0607    
cufflinks 16.9103 0.0 62.7653    
cufflinks 17.6669 0.0 65.0761    
cufflinks 8.07091 0.0 26.9626    
cufflinks 14.4709 0.0 54.5254    
cufflinks 24.7866 0.0 91.4745 High High
cufflinks 11.0904 0.0 43.1693    
cufflinks 3.005       High
cufflinks 0.056       Low
cufflinks 0.799        
cufflinks 2.027        
cufflinks 2.906       High
cufflinks 0.169       Low
cufflinks 1.268        
cufflinks 0.587        
cufflinks 1.595        
cufflinks 1.552        
cufflinks 1.236        
cufflinks 0.215       Low
cufflinks 1.251        
cufflinks 1.315        
cufflinks 0.125       Low
cufflinks 1.102        
cufflinks 0.369        

0 Strain