Gene : Glyma.19G173800 G. max Wm82.a2.v1
Defline:  (1 of 135) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1738
Name:  ? Glyma.19G173800 Secondary Identifier:  ? PAC:30513547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G173800 0.5kb upstream 0.5kb upstream 3920 true Chr19: 43414693-43418612 Glycine max
Glyma.19G173800 0.5kb upstream 0.5kb upstream 500 false Chr19: 43414693-43415192 Glycine max
Glyma.19G173800 0.5kb downstream 0.5kb downstream 3920 true Chr19: 43415193-43419112 Glycine max
Glyma.19G173800 0.5kb downstream 0.5kb downstream 500 false Chr19: 43418613-43419112 Glycine max
Glyma.19G173800 1.0kb upstream 1.0kb upstream 4420 true Chr19: 43414193-43418612 Glycine max
Glyma.19G173800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43414193-43415192 Glycine max
Glyma.19G173800 1.0kb downstream 1.0kb downstream 4420 true Chr19: 43415193-43419612 Glycine max
Glyma.19G173800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43418613-43419612 Glycine max
Glyma.19G173800 2.0kb upstream 2.0kb upstream 5420 true Chr19: 43413193-43418612 Glycine max
Glyma.19G173800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43413193-43415192 Glycine max
Glyma.19G173800 2.0kb downstream 2.0kb downstream 5420 true Chr19: 43415193-43420612 Glycine max
Glyma.19G173800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43418613-43420612 Glycine max
Glyma.19G173800 5.0kb upstream 5.0kb upstream 8420 true Chr19: 43410193-43418612 Glycine max
Glyma.19G173800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43410193-43415192 Glycine max
Glyma.19G173800 5.0kb downstream 5.0kb downstream 8420 true Chr19: 43415193-43423612 Glycine max
Glyma.19G173800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43418613-43423612 Glycine max
Glyma.19G173800 10.0kb upstream 10.0kb upstream 13420 true Chr19: 43405193-43418612 Glycine max
Glyma.19G173800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43405193-43415192 Glycine max
Glyma.19G173800 10.0kb downstream 10.0kb downstream 13420 true Chr19: 43415193-43428612 Glycine max
Glyma.19G173800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43418613-43428612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308286 5265 Fabidae View MSA
124069279 5270 Rosid View MSA
123751388 5271 Pentapetalae View MSA
122794828 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24491 0.0 4.41245    
cufflinks 0.846933 0.0 3.08247    
cufflinks 2.02269 0.0 6.81563    
cufflinks 3.72847 0.0 11.6103    
cufflinks 0.8517 0.0 3.09923    
cufflinks 0.290148 0.0 1.11149 Low  
cufflinks 2.91771E-4 0.0 0.00444153 Low Low
cufflinks 3.27417 0.0 10.4028    
cufflinks 2.09084 0.0 7.05438    
cufflinks 0.863       High
cufflinks 0.168        
cufflinks 0.98       High
cufflinks 0.302        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063       Low
cufflinks 0.282        
cufflinks 0.546        
cufflinks 1.03       High
cufflinks 0.207        
cufflinks 0.232        
cufflinks 1.008       High
cufflinks 0.275        
cufflinks 0.363        
cufflinks 0.417        
cufflinks 0.184        
cufflinks 0.106       Low

0 Strain