Gene : Glyma.04G193800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22880:SF134 - TRANSCRIPTION FACTOR GTE8-RELATED Genomic Order:  1938
Name:  ? Glyma.04G193800 Secondary Identifier:  ? PAC:30490145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G193800 0.5kb upstream 0.5kb upstream 5492 true Chr04: 46537021-46542512 Glycine max
Glyma.04G193800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46542013-46542512 Glycine max
Glyma.04G193800 0.5kb downstream 0.5kb downstream 5492 true Chr04: 46536521-46542012 Glycine max
Glyma.04G193800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46536521-46537020 Glycine max
Glyma.04G193800 1.0kb upstream 1.0kb upstream 5992 true Chr04: 46537021-46543012 Glycine max
Glyma.04G193800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46542013-46543012 Glycine max
Glyma.04G193800 1.0kb downstream 1.0kb downstream 5992 true Chr04: 46536021-46542012 Glycine max
Glyma.04G193800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46536021-46537020 Glycine max
Glyma.04G193800 2.0kb upstream 2.0kb upstream 6992 true Chr04: 46537021-46544012 Glycine max
Glyma.04G193800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46542013-46544012 Glycine max
Glyma.04G193800 2.0kb downstream 2.0kb downstream 6992 true Chr04: 46535021-46542012 Glycine max
Glyma.04G193800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46535021-46537020 Glycine max
Glyma.04G193800 5.0kb upstream 5.0kb upstream 9992 true Chr04: 46537021-46547012 Glycine max
Glyma.04G193800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46542013-46547012 Glycine max
Glyma.04G193800 5.0kb downstream 5.0kb downstream 9992 true Chr04: 46532021-46542012 Glycine max
Glyma.04G193800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46532021-46537020 Glycine max
Glyma.04G193800 10.0kb upstream 10.0kb upstream 14992 true Chr04: 46537021-46552012 Glycine max
Glyma.04G193800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46542013-46552012 Glycine max
Glyma.04G193800 10.0kb downstream 10.0kb downstream 14992 true Chr04: 46527021-46542012 Glycine max
Glyma.04G193800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46527021-46537020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303981 5265 Fabidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.24544 0.0 22.0069    
cufflinks 10.3161 0.0 27.6605   High
cufflinks 7.97085 0.0 21.2722    
cufflinks 7.81825 0.0 20.861    
cufflinks 8.78344 0.0 23.4604    
cufflinks 7.12768 0.0 19.0184   Low
cufflinks 10.9261 0.0 29.3352   High
cufflinks 8.26242 0.0 22.0536    
cufflinks 8.49093 0.0 22.668    
cufflinks 10.031     High  
cufflinks 8.131     High  
cufflinks 10.255     High  
cufflinks 10.498     High  
cufflinks 12.059     High  
cufflinks 9.055     High  
cufflinks 17.44     High High
cufflinks 6.647     High Low
cufflinks 12.905     High  
cufflinks 15.336     High  
cufflinks 19.057     High High
cufflinks 7.341     High Low
cufflinks 18.334     High High
cufflinks 17.118     High High
cufflinks 8.618     High  
cufflinks 17.531     High High
cufflinks 7.876     High Low

0 Strain