Gene : Glyma.04G193400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10836//PTHR10836:SF44 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  1934
Name:  ? Glyma.04G193400 Secondary Identifier:  ? PAC:30490325
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G193400 0.5kb upstream 0.5kb upstream 3550 true Chr04: 46503906-46507455 Glycine max
Glyma.04G193400 0.5kb upstream 0.5kb upstream 500 false Chr04: 46503906-46504405 Glycine max
Glyma.04G193400 0.5kb downstream 0.5kb downstream 3550 true Chr04: 46504406-46507955 Glycine max
Glyma.04G193400 0.5kb downstream 0.5kb downstream 500 false Chr04: 46507456-46507955 Glycine max
Glyma.04G193400 1.0kb upstream 1.0kb upstream 4050 true Chr04: 46503406-46507455 Glycine max
Glyma.04G193400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46503406-46504405 Glycine max
Glyma.04G193400 1.0kb downstream 1.0kb downstream 4050 true Chr04: 46504406-46508455 Glycine max
Glyma.04G193400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46507456-46508455 Glycine max
Glyma.04G193400 2.0kb upstream 2.0kb upstream 5050 true Chr04: 46502406-46507455 Glycine max
Glyma.04G193400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46502406-46504405 Glycine max
Glyma.04G193400 2.0kb downstream 2.0kb downstream 5050 true Chr04: 46504406-46509455 Glycine max
Glyma.04G193400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46507456-46509455 Glycine max
Glyma.04G193400 5.0kb upstream 5.0kb upstream 8050 true Chr04: 46499406-46507455 Glycine max
Glyma.04G193400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46499406-46504405 Glycine max
Glyma.04G193400 5.0kb downstream 5.0kb downstream 8050 true Chr04: 46504406-46512455 Glycine max
Glyma.04G193400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46507456-46512455 Glycine max
Glyma.04G193400 10.0kb upstream 10.0kb upstream 13050 true Chr04: 46494406-46507455 Glycine max
Glyma.04G193400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46494406-46504405 Glycine max
Glyma.04G193400 10.0kb downstream 10.0kb downstream 13050 true Chr04: 46504406-46517455 Glycine max
Glyma.04G193400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46507456-46517455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 234.192 0.0 868.585 High  
cufflinks 351.863 0.0 1477.01 High  
cufflinks 140.381 0.0 460.17 High Low
cufflinks 369.907 0.0 1581.95 High  
cufflinks 433.12 0.0 1965.21 High  
cufflinks 274.119 0.0 1067.37 High  
cufflinks 554.071 0.0 2758.05 High High
cufflinks 304.59 0.0 1227.45 High  
cufflinks 308.417 0.0 1247.03 High  
cufflinks 213.196     High  
cufflinks 30.747     High Low
cufflinks 120.245     High  
cufflinks 275.033     High High
cufflinks 338.1     High High
cufflinks 42.674     High Low
cufflinks 145.362     High  
cufflinks 72.613     High  
cufflinks 170.929     High  
cufflinks 215.043     High  
cufflinks 100.484     High  
cufflinks 69.705     High  
cufflinks 117.524     High  
cufflinks 156.933     High  
cufflinks 39.541     High Low
cufflinks 116.292     High  
cufflinks 76.436     High  

0 Strain