Gene : Glyma.04G192800 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Genomic Order:  1928
Name:  ? Glyma.04G192800 Secondary Identifier:  ? PAC:30490266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G192800 0.5kb upstream 0.5kb upstream 2797 true Chr04: 46445789-46448585 Glycine max
Glyma.04G192800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46448086-46448585 Glycine max
Glyma.04G192800 0.5kb downstream 0.5kb downstream 2797 true Chr04: 46445289-46448085 Glycine max
Glyma.04G192800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46445289-46445788 Glycine max
Glyma.04G192800 1.0kb upstream 1.0kb upstream 3297 true Chr04: 46445789-46449085 Glycine max
Glyma.04G192800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46448086-46449085 Glycine max
Glyma.04G192800 1.0kb downstream 1.0kb downstream 3297 true Chr04: 46444789-46448085 Glycine max
Glyma.04G192800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46444789-46445788 Glycine max
Glyma.04G192800 2.0kb upstream 2.0kb upstream 4297 true Chr04: 46445789-46450085 Glycine max
Glyma.04G192800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46448086-46450085 Glycine max
Glyma.04G192800 2.0kb downstream 2.0kb downstream 4297 true Chr04: 46443789-46448085 Glycine max
Glyma.04G192800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46443789-46445788 Glycine max
Glyma.04G192800 5.0kb upstream 5.0kb upstream 7297 true Chr04: 46445789-46453085 Glycine max
Glyma.04G192800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46448086-46453085 Glycine max
Glyma.04G192800 5.0kb downstream 5.0kb downstream 7297 true Chr04: 46440789-46448085 Glycine max
Glyma.04G192800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46440789-46445788 Glycine max
Glyma.04G192800 10.0kb upstream 10.0kb upstream 12297 true Chr04: 46445789-46458085 Glycine max
Glyma.04G192800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46448086-46458085 Glycine max
Glyma.04G192800 10.0kb downstream 10.0kb downstream 12297 true Chr04: 46435789-46448085 Glycine max
Glyma.04G192800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46435789-46445788 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308896 5265 Fabidae View MSA
124062342 5270 Rosid View MSA
123740173 5271 Pentapetalae View MSA
122786223 5272 Eudicot View MSA
122048362 5273 Angiosperm View MSA
121344861 5274 Embryophyte View MSA
123424755 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35753 0.0 15.2128   High
cufflinks 1.51336 0.0 5.09189    
cufflinks 1.08558 0.0 3.77966    
cufflinks 1.91245 0.0 6.2422    
cufflinks 1.10535 0.0 3.842    
cufflinks 1.00773 0.0 3.53075    
cufflinks 1.442 0.0 4.87208    
cufflinks 1.29428 0.0 4.42193    
cufflinks 1.44173 0.0 4.86868    
cufflinks 0.504       Low
cufflinks 0.692        
cufflinks 1.577       High
cufflinks 0.86        
cufflinks 1.017        
cufflinks 0.766        
cufflinks 1.182        
cufflinks 0.901        
cufflinks 1.341       High
cufflinks 1.157        
cufflinks 1.236        
cufflinks 0.462       Low
cufflinks 1.044        
cufflinks 1.228        
cufflinks 0.565       Low
cufflinks 1.334       High
cufflinks 0.527       Low

0 Strain