Gene : Glyma.04G196800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13780:SF45 - CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED Genomic Order:  1968
Name:  ? Glyma.04G196800 Secondary Identifier:  ? PAC:30487779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G196800 0.5kb upstream 0.5kb upstream 7480 true Chr04: 46858082-46865561 Glycine max
Glyma.04G196800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46865062-46865561 Glycine max
Glyma.04G196800 0.5kb downstream 0.5kb downstream 7480 true Chr04: 46857582-46865061 Glycine max
Glyma.04G196800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46857582-46858081 Glycine max
Glyma.04G196800 1.0kb upstream 1.0kb upstream 7980 true Chr04: 46858082-46866061 Glycine max
Glyma.04G196800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46865062-46866061 Glycine max
Glyma.04G196800 1.0kb downstream 1.0kb downstream 7980 true Chr04: 46857082-46865061 Glycine max
Glyma.04G196800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46857082-46858081 Glycine max
Glyma.04G196800 2.0kb upstream 2.0kb upstream 8980 true Chr04: 46858082-46867061 Glycine max
Glyma.04G196800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46865062-46867061 Glycine max
Glyma.04G196800 2.0kb downstream 2.0kb downstream 8980 true Chr04: 46856082-46865061 Glycine max
Glyma.04G196800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46856082-46858081 Glycine max
Glyma.04G196800 5.0kb upstream 5.0kb upstream 11980 true Chr04: 46858082-46870061 Glycine max
Glyma.04G196800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46865062-46870061 Glycine max
Glyma.04G196800 5.0kb downstream 5.0kb downstream 11980 true Chr04: 46853082-46865061 Glycine max
Glyma.04G196800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46853082-46858081 Glycine max
Glyma.04G196800 10.0kb upstream 10.0kb upstream 16980 true Chr04: 46858082-46875061 Glycine max
Glyma.04G196800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46865062-46875061 Glycine max
Glyma.04G196800 10.0kb downstream 10.0kb downstream 16980 true Chr04: 46848082-46865061 Glycine max
Glyma.04G196800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46848082-46858081 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311533 5265 Fabidae View MSA
124062366 5270 Rosid View MSA
123744247 5271 Pentapetalae View MSA
122790743 5272 Eudicot View MSA
122042144 5273 Angiosperm View MSA
121349998 5274 Embryophyte View MSA
123381535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1938 0.0 72.6265    
cufflinks 9.60151 0.0 34.0507    
cufflinks 34.1968 0.0 134.744 High High
cufflinks 11.164 0.0 39.318    
cufflinks 12.8422 0.0 49.8393    
cufflinks 20.3524 0.0 72.8825    
cufflinks 8.75021 0.0 31.9383   Low
cufflinks 11.3093 0.0 39.7651    
cufflinks 11.9901 0.0 42.2153    
cufflinks 1.572       Low
cufflinks 2.713        
cufflinks 3.529        
cufflinks 2.24        
cufflinks 1.767        
cufflinks 0.802       Low
cufflinks 2.823        
cufflinks 3.035        
cufflinks 2.217        
cufflinks 1.688        
cufflinks 3.865       High
cufflinks 2.441        
cufflinks 3.115        
cufflinks 2.198        
cufflinks 3.119        
cufflinks 3.462        
cufflinks 2.758        

0 Strain