Gene : Glyma.04G133100 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase / Aminoimidazolecarboxamide ribonucleotide transformylase Genomic Order:  1331
Name:  ? Glyma.04G133100 Secondary Identifier:  ? PAC:30488030
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6124 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G133100 0.5kb upstream 0.5kb upstream 6881 true Chr04: 18917456-18924336 Glycine max
Glyma.04G133100 0.5kb upstream 0.5kb upstream 500 false Chr04: 18923837-18924336 Glycine max
Glyma.04G133100 0.5kb downstream 0.5kb downstream 6881 true Chr04: 18916956-18923836 Glycine max
Glyma.04G133100 0.5kb downstream 0.5kb downstream 500 false Chr04: 18916956-18917455 Glycine max
Glyma.04G133100 1.0kb upstream 1.0kb upstream 7381 true Chr04: 18917456-18924836 Glycine max
Glyma.04G133100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18923837-18924836 Glycine max
Glyma.04G133100 1.0kb downstream 1.0kb downstream 7381 true Chr04: 18916456-18923836 Glycine max
Glyma.04G133100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18916456-18917455 Glycine max
Glyma.04G133100 2.0kb upstream 2.0kb upstream 8381 true Chr04: 18917456-18925836 Glycine max
Glyma.04G133100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18923837-18925836 Glycine max
Glyma.04G133100 2.0kb downstream 2.0kb downstream 8381 true Chr04: 18915456-18923836 Glycine max
Glyma.04G133100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18915456-18917455 Glycine max
Glyma.04G133100 5.0kb upstream 5.0kb upstream 11381 true Chr04: 18917456-18928836 Glycine max
Glyma.04G133100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18923837-18928836 Glycine max
Glyma.04G133100 5.0kb downstream 5.0kb downstream 11381 true Chr04: 18912456-18923836 Glycine max
Glyma.04G133100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18912456-18917455 Glycine max
Glyma.04G133100 10.0kb upstream 10.0kb upstream 16381 true Chr04: 18917456-18933836 Glycine max
Glyma.04G133100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18923837-18933836 Glycine max
Glyma.04G133100 10.0kb downstream 10.0kb downstream 16381 true Chr04: 18907456-18923836 Glycine max
Glyma.04G133100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18907456-18917455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308881 5265 Fabidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.804 0.0 50.5159    
cufflinks 13.5407 0.0 36.1279    
cufflinks 7.02752 0.0 19.0771   Low
cufflinks 9.33204 0.0 25.0326    
cufflinks 34.3976 0.0 96.4613 High High
cufflinks 15.3792 0.0 41.0878    
cufflinks 9.21539 0.0 24.7431    
cufflinks 9.3914 0.0 25.1776    
cufflinks 41.0632 0.0 117.828 High High
cufflinks 3.536        
cufflinks 0.762       Low
cufflinks 4.174        
cufflinks 10.595     High High
cufflinks 12.653     High High
cufflinks 14.71     High High
cufflinks 4.328        
cufflinks 4.25        
cufflinks 4.08        
cufflinks 6.213        
cufflinks 2.634        
cufflinks 1.409       Low
cufflinks 3.523        
cufflinks 4.519        
cufflinks 1.074       Low
cufflinks 3.799        
cufflinks 3.691        

0 Strain