Gene : Glyma.04G130100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  1301
Name:  ? Glyma.04G130100 Secondary Identifier:  ? PAC:30488159
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G130100 0.5kb upstream 0.5kb upstream 3388 true Chr04: 18193883-18197270 Glycine max
Glyma.04G130100 0.5kb upstream 0.5kb upstream 500 false Chr04: 18196771-18197270 Glycine max
Glyma.04G130100 0.5kb downstream 0.5kb downstream 3388 true Chr04: 18193383-18196770 Glycine max
Glyma.04G130100 0.5kb downstream 0.5kb downstream 500 false Chr04: 18193383-18193882 Glycine max
Glyma.04G130100 1.0kb upstream 1.0kb upstream 3888 true Chr04: 18193883-18197770 Glycine max
Glyma.04G130100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18196771-18197770 Glycine max
Glyma.04G130100 1.0kb downstream 1.0kb downstream 3888 true Chr04: 18192883-18196770 Glycine max
Glyma.04G130100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18192883-18193882 Glycine max
Glyma.04G130100 2.0kb upstream 2.0kb upstream 4888 true Chr04: 18193883-18198770 Glycine max
Glyma.04G130100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18196771-18198770 Glycine max
Glyma.04G130100 2.0kb downstream 2.0kb downstream 4888 true Chr04: 18191883-18196770 Glycine max
Glyma.04G130100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18191883-18193882 Glycine max
Glyma.04G130100 5.0kb upstream 5.0kb upstream 7888 true Chr04: 18193883-18201770 Glycine max
Glyma.04G130100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18196771-18201770 Glycine max
Glyma.04G130100 5.0kb downstream 5.0kb downstream 7888 true Chr04: 18188883-18196770 Glycine max
Glyma.04G130100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18188883-18193882 Glycine max
Glyma.04G130100 10.0kb upstream 10.0kb upstream 12888 true Chr04: 18193883-18206770 Glycine max
Glyma.04G130100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18196771-18206770 Glycine max
Glyma.04G130100 10.0kb downstream 10.0kb downstream 12888 true Chr04: 18183883-18196770 Glycine max
Glyma.04G130100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18183883-18193882 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299789 0.0 1.14011    
cufflinks 0.59847 0.0 2.20075    
cufflinks 0.678495 0.0 2.47374    
cufflinks 0.594566 0.0 2.18508    
cufflinks 0.7585 0.0 2.75553    
cufflinks 0.953162 0.0 3.4124    
cufflinks 0.119536 0.0 0.472025 Low Low
cufflinks 1.24026 0.0 4.33363    
cufflinks 1.73315 0.0 5.87392   High
cufflinks 2.162       High
cufflinks 0.626        
cufflinks 0.502        
cufflinks 2.404       High
cufflinks 0.563        
cufflinks 0.047     Low Low
cufflinks 0.417        
cufflinks 0.74        
cufflinks 1.11        
cufflinks 0.168       Low
cufflinks 0.605        
cufflinks 1.162        
cufflinks 0.489        
cufflinks 0.283        
cufflinks 0.513        
cufflinks 0.685        
cufflinks 1.064        

0 Strain