Gene : Glyma.19G166100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11909:SF178 - CASEIN KINASE 1-LIKE PROTEIN 8 Genomic Order:  1661
Name:  ? Glyma.19G166100 Secondary Identifier:  ? PAC:30513043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G166100 0.5kb upstream 0.5kb upstream 7140 true Chr19: 42723046-42730185 Glycine max
Glyma.19G166100 0.5kb upstream 0.5kb upstream 500 false Chr19: 42723046-42723545 Glycine max
Glyma.19G166100 0.5kb downstream 0.5kb downstream 7140 true Chr19: 42723546-42730685 Glycine max
Glyma.19G166100 0.5kb downstream 0.5kb downstream 500 false Chr19: 42730186-42730685 Glycine max
Glyma.19G166100 1.0kb upstream 1.0kb upstream 7640 true Chr19: 42722546-42730185 Glycine max
Glyma.19G166100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42722546-42723545 Glycine max
Glyma.19G166100 1.0kb downstream 1.0kb downstream 7640 true Chr19: 42723546-42731185 Glycine max
Glyma.19G166100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42730186-42731185 Glycine max
Glyma.19G166100 2.0kb upstream 2.0kb upstream 8640 true Chr19: 42721546-42730185 Glycine max
Glyma.19G166100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42721546-42723545 Glycine max
Glyma.19G166100 2.0kb downstream 2.0kb downstream 8640 true Chr19: 42723546-42732185 Glycine max
Glyma.19G166100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42730186-42732185 Glycine max
Glyma.19G166100 5.0kb upstream 5.0kb upstream 11640 true Chr19: 42718546-42730185 Glycine max
Glyma.19G166100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42718546-42723545 Glycine max
Glyma.19G166100 5.0kb downstream 5.0kb downstream 11640 true Chr19: 42723546-42735185 Glycine max
Glyma.19G166100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42730186-42735185 Glycine max
Glyma.19G166100 10.0kb upstream 10.0kb upstream 16640 true Chr19: 42713546-42730185 Glycine max
Glyma.19G166100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42713546-42723545 Glycine max
Glyma.19G166100 10.0kb downstream 10.0kb downstream 16640 true Chr19: 42723546-42740185 Glycine max
Glyma.19G166100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42730186-42740185 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304053 5265 Fabidae View MSA
124074608 5270 Rosid View MSA
123745824 5271 Pentapetalae View MSA
122787812 5272 Eudicot View MSA
122045812 5273 Angiosperm View MSA
121310507 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8828 0.0 56.7292   Low
cufflinks 18.6684 0.0 71.6731    
cufflinks 22.0551 0.0 86.4597 High  
cufflinks 19.9629 0.0 77.4692 High  
cufflinks 20.3918 0.0 79.212 High  
cufflinks 43.0886 0.0 176.536 High High
cufflinks 17.515 0.0 67.195    
cufflinks 21.953 0.0 85.9692 High  
cufflinks 18.2986 0.0 70.6098    
cufflinks 2.797        
cufflinks 2.575        
cufflinks 3.063        
cufflinks 3.382       High
cufflinks 3.583       High
cufflinks 2.275       Low
cufflinks 2.521        
cufflinks 1.819       Low
cufflinks 3.138        
cufflinks 3.051        
cufflinks 2.562        
cufflinks 2.769        
cufflinks 2.676        
cufflinks 2.202       Low
cufflinks 3.138        
cufflinks 2.392        
cufflinks 3.139        

0 Strain