Gene : Glyma.04G139800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21495:SF59 - DIRIGENT PROTEIN 20-RELATED Genomic Order:  1398
Name:  ? Glyma.04G139800 Secondary Identifier:  ? PAC:30489110
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G139800 0.5kb upstream 0.5kb upstream 1515 true Chr04: 22603493-22605007 Glycine max
Glyma.04G139800 0.5kb upstream 0.5kb upstream 500 false Chr04: 22603493-22603992 Glycine max
Glyma.04G139800 0.5kb downstream 0.5kb downstream 1515 true Chr04: 22603993-22605507 Glycine max
Glyma.04G139800 0.5kb downstream 0.5kb downstream 500 false Chr04: 22605008-22605507 Glycine max
Glyma.04G139800 1.0kb upstream 1.0kb upstream 2015 true Chr04: 22602993-22605007 Glycine max
Glyma.04G139800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22602993-22603992 Glycine max
Glyma.04G139800 1.0kb downstream 1.0kb downstream 2015 true Chr04: 22603993-22606007 Glycine max
Glyma.04G139800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22605008-22606007 Glycine max
Glyma.04G139800 2.0kb upstream 2.0kb upstream 3015 true Chr04: 22601993-22605007 Glycine max
Glyma.04G139800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22601993-22603992 Glycine max
Glyma.04G139800 2.0kb downstream 2.0kb downstream 3015 true Chr04: 22603993-22607007 Glycine max
Glyma.04G139800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22605008-22607007 Glycine max
Glyma.04G139800 5.0kb upstream 5.0kb upstream 6015 true Chr04: 22598993-22605007 Glycine max
Glyma.04G139800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22598993-22603992 Glycine max
Glyma.04G139800 5.0kb downstream 5.0kb downstream 6015 true Chr04: 22603993-22610007 Glycine max
Glyma.04G139800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22605008-22610007 Glycine max
Glyma.04G139800 10.0kb upstream 10.0kb upstream 11015 true Chr04: 22593993-22605007 Glycine max
Glyma.04G139800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22593993-22603992 Glycine max
Glyma.04G139800 10.0kb downstream 10.0kb downstream 11015 true Chr04: 22603993-22615007 Glycine max
Glyma.04G139800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22605008-22615007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313244 5265 Fabidae View MSA
124071880 5270 Rosid View MSA
123745116 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.274605 0.0 1.07627    
cufflinks 57.6293 0.0 155.098 High  
cufflinks 0.0227535 0.0 0.104534 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 70.9818 0.0 193.01 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.755687 0.0 2.83905    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain