Gene : Glyma.04G141000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12768 - BECLIN 1 Genomic Order:  1410
Name:  ? Glyma.04G141000 Secondary Identifier:  ? PAC:30487466
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G141000 0.5kb upstream 0.5kb upstream 17104 true Chr04: 23665626-23682729 Glycine max
Glyma.04G141000 0.5kb upstream 0.5kb upstream 500 false Chr04: 23682230-23682729 Glycine max
Glyma.04G141000 0.5kb downstream 0.5kb downstream 17104 true Chr04: 23665126-23682229 Glycine max
Glyma.04G141000 0.5kb downstream 0.5kb downstream 500 false Chr04: 23665126-23665625 Glycine max
Glyma.04G141000 1.0kb upstream 1.0kb upstream 17604 true Chr04: 23665626-23683229 Glycine max
Glyma.04G141000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23682230-23683229 Glycine max
Glyma.04G141000 1.0kb downstream 1.0kb downstream 17604 true Chr04: 23664626-23682229 Glycine max
Glyma.04G141000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23664626-23665625 Glycine max
Glyma.04G141000 2.0kb upstream 2.0kb upstream 18604 true Chr04: 23665626-23684229 Glycine max
Glyma.04G141000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23682230-23684229 Glycine max
Glyma.04G141000 2.0kb downstream 2.0kb downstream 18604 true Chr04: 23663626-23682229 Glycine max
Glyma.04G141000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23663626-23665625 Glycine max
Glyma.04G141000 5.0kb upstream 5.0kb upstream 21604 true Chr04: 23665626-23687229 Glycine max
Glyma.04G141000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23682230-23687229 Glycine max
Glyma.04G141000 5.0kb downstream 5.0kb downstream 21604 true Chr04: 23660626-23682229 Glycine max
Glyma.04G141000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23660626-23665625 Glycine max
Glyma.04G141000 10.0kb upstream 10.0kb upstream 26604 true Chr04: 23665626-23692229 Glycine max
Glyma.04G141000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23682230-23692229 Glycine max
Glyma.04G141000 10.0kb downstream 10.0kb downstream 26604 true Chr04: 23655626-23682229 Glycine max
Glyma.04G141000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23655626-23665625 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300464 5265 Fabidae View MSA
124064033 5270 Rosid View MSA
123737768 5271 Pentapetalae View MSA
122791932 5272 Eudicot View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.7397 0.0 25.4155    
cufflinks 3.1967 0.0 17.6804   Low
cufflinks 12.1895 0.0 49.2264   High
cufflinks 5.23052 0.0 20.237    
cufflinks 4.71635 0.0 21.8093    
cufflinks 7.30773 0.0 30.7475    
cufflinks 4.5653 0.0 18.3332    
cufflinks 5.98799 0.0 26.5628    
cufflinks 6.19846 0.0 26.7554    
cufflinks 0.148       Low
cufflinks 0.28        
cufflinks 0.342       High
cufflinks 0.159        
cufflinks 0.142       Low
cufflinks 0.298       High
cufflinks 0.224        
cufflinks 0.149       Low
cufflinks 0.22        
cufflinks 0.15       Low
cufflinks 0.209        
cufflinks 0.296       High
cufflinks 0.215        
cufflinks 0.162        
cufflinks 0.296       High
cufflinks 0.209        
cufflinks 0.279        

0 Strain