Gene : Glyma.04G138600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1386
Name:  ? Glyma.04G138600 Secondary Identifier:  ? PAC:30489349
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G138600 0.5kb upstream 0.5kb upstream 3444 true Chr04: 21670711-21674154 Glycine max
Glyma.04G138600 0.5kb upstream 0.5kb upstream 500 false Chr04: 21673655-21674154 Glycine max
Glyma.04G138600 0.5kb downstream 0.5kb downstream 3444 true Chr04: 21670211-21673654 Glycine max
Glyma.04G138600 0.5kb downstream 0.5kb downstream 500 false Chr04: 21670211-21670710 Glycine max
Glyma.04G138600 1.0kb upstream 1.0kb upstream 3944 true Chr04: 21670711-21674654 Glycine max
Glyma.04G138600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21673655-21674654 Glycine max
Glyma.04G138600 1.0kb downstream 1.0kb downstream 3944 true Chr04: 21669711-21673654 Glycine max
Glyma.04G138600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21669711-21670710 Glycine max
Glyma.04G138600 2.0kb upstream 2.0kb upstream 4944 true Chr04: 21670711-21675654 Glycine max
Glyma.04G138600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21673655-21675654 Glycine max
Glyma.04G138600 2.0kb downstream 2.0kb downstream 4944 true Chr04: 21668711-21673654 Glycine max
Glyma.04G138600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21668711-21670710 Glycine max
Glyma.04G138600 5.0kb upstream 5.0kb upstream 7944 true Chr04: 21670711-21678654 Glycine max
Glyma.04G138600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21673655-21678654 Glycine max
Glyma.04G138600 5.0kb downstream 5.0kb downstream 7944 true Chr04: 21665711-21673654 Glycine max
Glyma.04G138600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21665711-21670710 Glycine max
Glyma.04G138600 10.0kb upstream 10.0kb upstream 12944 true Chr04: 21670711-21683654 Glycine max
Glyma.04G138600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21673655-21683654 Glycine max
Glyma.04G138600 10.0kb downstream 10.0kb downstream 12944 true Chr04: 21660711-21673654 Glycine max
Glyma.04G138600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21660711-21670710 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311432 5265 Fabidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7211 0.0 42.597   Low
cufflinks 31.9404 0.0 85.3661 High  
cufflinks 132.879 0.0 409.922 High High
cufflinks 35.1802 0.0 94.2578 High  
cufflinks 23.4669 0.0 62.6866 High  
cufflinks 20.8941 0.0 55.9273    
cufflinks 34.8518 0.0 93.2323 High  
cufflinks 50.9382 0.0 139.039 High  
cufflinks 38.3093 0.0 102.884 High  
cufflinks 13.442     High  
cufflinks 47.474     High High
cufflinks 39.34     High  
cufflinks 2.095       Low
cufflinks 4.614       Low
cufflinks 38.239     High  
cufflinks 24.116     High  
cufflinks 10.466     High  
cufflinks 21.696     High  
cufflinks 16.371     High  
cufflinks 28.441     High  
cufflinks 46.503     High High
cufflinks 22.062     High  
cufflinks 10.753     High  
cufflinks 32.06     High  
cufflinks 27.442     High  
cufflinks 15.165     High  

0 Strain