Gene : Glyma.04G148300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22603:SF24 - PROTEIN CKA-1, ISOFORM A Genomic Order:  1483
Name:  ? Glyma.04G148300 Secondary Identifier:  ? PAC:30489075
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3385 Glycine max pathologic  
Gmax PWY4FS-6 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G148300 0.5kb upstream 0.5kb upstream 7339 true Chr04: 30359427-30366765 Glycine max
Glyma.04G148300 0.5kb upstream 0.5kb upstream 500 false Chr04: 30359427-30359926 Glycine max
Glyma.04G148300 0.5kb downstream 0.5kb downstream 7339 true Chr04: 30359927-30367265 Glycine max
Glyma.04G148300 0.5kb downstream 0.5kb downstream 500 false Chr04: 30366766-30367265 Glycine max
Glyma.04G148300 1.0kb upstream 1.0kb upstream 7839 true Chr04: 30358927-30366765 Glycine max
Glyma.04G148300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30358927-30359926 Glycine max
Glyma.04G148300 1.0kb downstream 1.0kb downstream 7839 true Chr04: 30359927-30367765 Glycine max
Glyma.04G148300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30366766-30367765 Glycine max
Glyma.04G148300 2.0kb upstream 2.0kb upstream 8839 true Chr04: 30357927-30366765 Glycine max
Glyma.04G148300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30357927-30359926 Glycine max
Glyma.04G148300 2.0kb downstream 2.0kb downstream 8839 true Chr04: 30359927-30368765 Glycine max
Glyma.04G148300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30366766-30368765 Glycine max
Glyma.04G148300 5.0kb upstream 5.0kb upstream 11839 true Chr04: 30354927-30366765 Glycine max
Glyma.04G148300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30354927-30359926 Glycine max
Glyma.04G148300 5.0kb downstream 5.0kb downstream 11839 true Chr04: 30359927-30371765 Glycine max
Glyma.04G148300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30366766-30371765 Glycine max
Glyma.04G148300 10.0kb upstream 10.0kb upstream 16839 true Chr04: 30349927-30366765 Glycine max
Glyma.04G148300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30349927-30359926 Glycine max
Glyma.04G148300 10.0kb downstream 10.0kb downstream 16839 true Chr04: 30359927-30376765 Glycine max
Glyma.04G148300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30366766-30376765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301595 5265 Fabidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.198 0.0 63.427    
cufflinks 10.5265 0.0 38.59    
cufflinks 24.6552 0.0 86.5745 High High
cufflinks 13.3478 0.0 47.4317    
cufflinks 9.41565 0.0 35.635    
cufflinks 11.2491 0.0 40.6336    
cufflinks 6.20688 0.0 26.0747   Low
cufflinks 20.9192 0.0 73.4305   High
cufflinks 11.0883 0.0 40.3188    
cufflinks 1.242        
cufflinks 0.359       Low
cufflinks 2.127        
cufflinks 1.064        
cufflinks 1.119        
cufflinks 0.24       Low
cufflinks 1.527        
cufflinks 1.413        
cufflinks 2.535       High
cufflinks 1.493        
cufflinks 1.572        
cufflinks 0.442       Low
cufflinks 1.82        
cufflinks 2.351       High
cufflinks 0.672        
cufflinks 1.41        
cufflinks 0.763        

0 Strain