Gene : Glyma.04G148200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF09320 - Domain of unknown function (DUF1977) (DUF1977) Genomic Order:  1482
Name:  ? Glyma.04G148200 Secondary Identifier:  ? PAC:30489604
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G148200 0.5kb upstream 0.5kb upstream 2288 true Chr04: 30302700-30304987 Glycine max
Glyma.04G148200 0.5kb upstream 0.5kb upstream 500 false Chr04: 30304488-30304987 Glycine max
Glyma.04G148200 0.5kb downstream 0.5kb downstream 2288 true Chr04: 30302200-30304487 Glycine max
Glyma.04G148200 0.5kb downstream 0.5kb downstream 500 false Chr04: 30302200-30302699 Glycine max
Glyma.04G148200 1.0kb upstream 1.0kb upstream 2788 true Chr04: 30302700-30305487 Glycine max
Glyma.04G148200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30304488-30305487 Glycine max
Glyma.04G148200 1.0kb downstream 1.0kb downstream 2788 true Chr04: 30301700-30304487 Glycine max
Glyma.04G148200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30301700-30302699 Glycine max
Glyma.04G148200 2.0kb upstream 2.0kb upstream 3788 true Chr04: 30302700-30306487 Glycine max
Glyma.04G148200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30304488-30306487 Glycine max
Glyma.04G148200 2.0kb downstream 2.0kb downstream 3788 true Chr04: 30300700-30304487 Glycine max
Glyma.04G148200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30300700-30302699 Glycine max
Glyma.04G148200 5.0kb upstream 5.0kb upstream 6788 true Chr04: 30302700-30309487 Glycine max
Glyma.04G148200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30304488-30309487 Glycine max
Glyma.04G148200 5.0kb downstream 5.0kb downstream 6788 true Chr04: 30297700-30304487 Glycine max
Glyma.04G148200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30297700-30302699 Glycine max
Glyma.04G148200 10.0kb upstream 10.0kb upstream 11788 true Chr04: 30302700-30314487 Glycine max
Glyma.04G148200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30304488-30314487 Glycine max
Glyma.04G148200 10.0kb downstream 10.0kb downstream 11788 true Chr04: 30292700-30304487 Glycine max
Glyma.04G148200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30292700-30302699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307326 5265 Fabidae View MSA
124061227 5270 Rosid View MSA
123743637 5271 Pentapetalae View MSA
122792301 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8 0.0 47.5094    
cufflinks 11.6346 0.0 31.4914   Low
cufflinks 21.3384 0.0 56.9409 High  
cufflinks 15.0675 0.0 40.3503    
cufflinks 19.2605 0.0 51.385    
cufflinks 26.4775 0.0 70.9944 High High
cufflinks 20.6589 0.0 55.1274    
cufflinks 20.4765 0.0 54.631    
cufflinks 18.1431 0.0 48.4156    
cufflinks 16.025     High  
cufflinks 21.185     High High
cufflinks 15.903     High  
cufflinks 13.617     High  
cufflinks 13.455     High  
cufflinks 12.973     High  
cufflinks 13.669     High  
cufflinks 22.173     High High
cufflinks 13.621     High  
cufflinks 11.124     High Low
cufflinks 13.61     High  
cufflinks 17.546     High  
cufflinks 14.022     High  
cufflinks 12.968     High  
cufflinks 22.046     High High
cufflinks 12.478     High  
cufflinks 19.128     High High

0 Strain