Gene : Glyma.04G158800 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1588
Name:  ? Glyma.04G158800 Secondary Identifier:  ? PAC:30491248
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G158800 0.5kb upstream 0.5kb upstream 2369 true Chr04: 39006819-39009187 Glycine max
Glyma.04G158800 0.5kb upstream 0.5kb upstream 500 false Chr04: 39006819-39007318 Glycine max
Glyma.04G158800 0.5kb downstream 0.5kb downstream 2369 true Chr04: 39007319-39009687 Glycine max
Glyma.04G158800 0.5kb downstream 0.5kb downstream 500 false Chr04: 39009188-39009687 Glycine max
Glyma.04G158800 1.0kb upstream 1.0kb upstream 2869 true Chr04: 39006319-39009187 Glycine max
Glyma.04G158800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39006319-39007318 Glycine max
Glyma.04G158800 1.0kb downstream 1.0kb downstream 2869 true Chr04: 39007319-39010187 Glycine max
Glyma.04G158800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39009188-39010187 Glycine max
Glyma.04G158800 2.0kb upstream 2.0kb upstream 3869 true Chr04: 39005319-39009187 Glycine max
Glyma.04G158800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39005319-39007318 Glycine max
Glyma.04G158800 2.0kb downstream 2.0kb downstream 3869 true Chr04: 39007319-39011187 Glycine max
Glyma.04G158800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39009188-39011187 Glycine max
Glyma.04G158800 5.0kb upstream 5.0kb upstream 6869 true Chr04: 39002319-39009187 Glycine max
Glyma.04G158800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39002319-39007318 Glycine max
Glyma.04G158800 5.0kb downstream 5.0kb downstream 6869 true Chr04: 39007319-39014187 Glycine max
Glyma.04G158800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39009188-39014187 Glycine max
Glyma.04G158800 10.0kb upstream 10.0kb upstream 11869 true Chr04: 38997319-39009187 Glycine max
Glyma.04G158800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 38997319-39007318 Glycine max
Glyma.04G158800 10.0kb downstream 10.0kb downstream 11869 true Chr04: 39007319-39019187 Glycine max
Glyma.04G158800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39009188-39019187 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310656 5265 Fabidae View MSA
124061595 5270 Rosid View MSA
123739205 5271 Pentapetalae View MSA
122790965 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6074 0.0 39.1033   High
cufflinks 4.20214 0.0 12.5606    
cufflinks 10.016 0.0 27.3535    
cufflinks 8.46556 0.0 23.3299    
cufflinks 2.04144 0.0 6.70289    
cufflinks 0.212451 0.0 0.817647 Low Low
cufflinks 0.892516 0.0 3.18885   Low
cufflinks 8.25669 0.0 22.7909    
cufflinks 4.97023 0.0 14.4705    
cufflinks 2.164        
cufflinks 0.063       Low
cufflinks 6.557        
cufflinks 0.311        
cufflinks 0.01     Low Low
cufflinks 0.765        
cufflinks 5.523        
cufflinks 0.184        
cufflinks 5.238        
cufflinks 2.618        
cufflinks 9.791     High High
cufflinks 0.14        
cufflinks 7.545     High  
cufflinks 5.652        
cufflinks 0.062       Low
cufflinks 8.856     High High
cufflinks 0.062     Low Low

0 Strain